Motif HL_69752.1 Version HL_69752.1 of this group appears in releases 3.95 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7KI3_001 | 7KI3 | 0.1378 | 3 | C | HCV genotype 1a miR-122 site-1 | C | 10 | U | 11 | G | 15 | cWW |
| 2 | HL_5NFV_001 | 5NFV | 0.1176 | 3 | B | pre-crRNA | C | -10 | U | -9 | G | -5 | cWW |
| 3 | HL_8Y0B_001 | 8Y0B | 0.1433 | 3 | B | RNA (53-MER) | C | -11 | U | -10 | G | -6 | cWW |
| 4 | HL_8H9D_001 | 8H9D | 0.0979 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
| 5 | HL_8Y03_001 | 8Y03 | 0.0004 | 4 | G | RNA (41-MER) | C | 11 | U | 12 | G | 17 | cWW |
| 6 | HL_5ID6_001 | 5ID6 | 0.0000 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
| 7 | HL_5XUZ_001 | 5XUZ | 0.0622 | 4 | B | crRNA | C | -12 | U | -11 | G | -6 | cWW |
| 8 | HL_8Y05_001 | 8Y05 | 0.0937 | 4 | B | RNA (29-MER) | C | -12 | U | -11 | G | -6 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAGUG | 5 |
| CUGUUG | 2 |
| CUGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAGU | 5 |
| UGUU | 2 |
| UGAU | 1 |
Release history
| Release | 3.95 |
|---|---|
| Date | 2025-03-26 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: