Motif HL_81930.1 Version HL_81930.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1U0B_001 | 1U0B | 0.0000 | 4 | A | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | tSH |
| 2 | HL_4V8P_154 | 4V8P | 0.8314 | 1 | D1 | LSU rRNA | G | 3306 | A | 3307 | A | 3308 | U | 3309 | U | 3310 | C | 3312 | C | 3313 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAGCGGUUAU | 1 |
| GAAUUUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGGUUA | 1 |
| AAUUUC | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R-R-R
- Heat map statistics
- Min 0.83 | Avg 0.42 | Max 0.83
Coloring options: