Motif HL_81954.1 Version HL_81954.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5U3G_003 | 5U3G | 0.0000 | 3 | B | Guanidine-I riboswitch | G | 68 | A | 69 | A | 72 | A | 73 | A | 74 | C | 76 | cWW | tHH |
| 2 | HL_5J7L_153 | 5J7L | 0.9787 | 1 | DA | LSU rRNA | U | 641 | U | 642 | A | 643 | A | 644 | C | 645 | G | 647 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAAAAAGC | 1 |
| UUAACUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAAAAG | 1 |
| UAACU | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: