Motif HL_91228.1 Version HL_91228.1 of this group appears in releases 4.0 to 4.3
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_013 | 4V9F | 0.0000 | 1 | 0 | LSU rRNA | G | 390 | U | 391 | U | 392 | G | 393 | G | 394 | A | 395 | A | 397 | U | 398 | C | 399 | cWW | cwW |
| 2 | HL_9E6Q_013 | 9E6Q | 0.2875 | 1 | 1 | LSU rRNA | C | 415 | U | 416 | U | 417 | A | 418 | G | 419 | U | 420 | U | 422 | U | 423 | G | 424 | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGGAUAUC | 1 |
| CUUAGUUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGGAUAU | 1 |
| UUAGUUUU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Heat map statistics
- Min 0.29 | Avg 0.14 | Max 0.29
Coloring options: