Motif HL_91503.7 Version HL_91503.7 of this group appears in releases 3.91 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 4-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_145 | 5J7L | 0.3091 | 2 | DA | LSU rRNA | A | 382 | C | 383 | A | 384 | C | 385 | U | 387 | G | 388 | U | 390 | A | 391 | U | 392 | cWW | |
| 2 | HL_9DFE_012 | 9DFE | 0.0000 | 2 | 1A | LSU rRNA | G | 382 | U | 383 | U | 384 | C | 385 | U | 387 | G | 388 | A | 390 | G | 391 | C | 392 | cWW | ntsS |
| 3 | HL_7A0S_013 | 7A0S | 0.2922 | 2 | X | LSU rRNA | G | 395 | U | 396 | U | 397 | C | 398 | U | 400 | G | 401 | A | 403 | A | 404 | C | 405 | cWW | ntsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACACGUGGUAU | 1 |
| GUUCGUGGAGC | 1 |
| GUUCGUGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CACGUGGUA | 1 |
| UUCGUGGAG | 1 |
| UUCGUGAAA | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.29 | Avg 0.22 | Max 0.37
Coloring options: