Motif HL_92747.1 Version HL_92747.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6U8D_001 | 6U8D | 0.6174 | 0 | A | JIIIabc RNA (68-MER) | G | 161 | A | 162 | G | 163 | U | 164 | A | 165 | C | 166 | cWW | ncsS | |
| 2 | HL_3ADD_003 | 3ADD | 0.5286 | 0 | C | Selenocysteine transfer RNA | C | 47|||D | G | 47|||E | A | 47|||F | G | 47|||G | U | 47|||H | G | 47|||I | cWW | ||
| 3 | HL_4V88_187 | 4V88 | 0.0000 | 6 | A6 | SSU rRNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 74 | G | 81 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAC | 1 |
| CGAGUG | 1 |
| CAAUUUAUACAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUA | 1 |
| GAGU | 1 |
| AAUUUAUACA | 1 |
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