Motif HL_96927.1 Version HL_96927.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V7M_038 | 4V7M | 0.5602 | 5 | AY | tRNA | C | 12 | A | 13 | A | 14 | G | 15 | A | 21 | G | 22 | cWW | ntSH |
| 2 | HL_6ORD_220 | 6ORD | 0.0000 | 6 | QY | tRNA | U | 12 | C | 13 | A | 14 | G | 15 | G | 22 | A | 23 | ncWW | ncWW |
| 3 | HL_4WT8_234 | 4WT8 | 0.4899 | 6 | C3 | tRNA | U | 12 | C | 13 | A | 14 | G | 15 | G | 22 | A | 23 | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGCGGUAAG | 1 |
| UCAGCUGGGAGA | 1 |
| UCAGUCGGUAGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGGUAA | 1 |
| CAGCUGGGAG | 1 |
| CAGUCGGUAG | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, > 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.49 | Avg 0.37 | Max 0.63
Coloring options: