Motif IL_02111.1 Version IL_02111.1 of this group appears in releases 4.0 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-8 | 3-6 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8B0X_020 | 8B0X | 0.0000 | 0 | A | SSU rRNA | C | 492 | A | 493 | G | 494 | A | 495 | A | 496 | G | 497 | * | C | 440 | A | 441 | G | 442 | cWW | ncwW | ncSH | cWW |
| 2 | IL_8D28_004 | 8D28 | 0.7203 | 0 | B | RNA (33-MER) | C | 20 | C | 21 | C | 22 | U | 23 | U | 24 | G | 25 | * | C | 9 | A | 10 | G | 11 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGAAG*CAG | 1 |
| CCCUUG*CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGAA*A | 1 |
| CCUU*A | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: