#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-33-84-75-6
1 IL_3V2F_0273V2F0.21680A23S Ribosomal RNAU858G859U860A861G862*C915G916A917A918G919cWWcSHtWHtHScWW
2 IL_1S72_0341S720.000000 LSU rRNAG952G953U954A955G956*C1011A1012A1013A1014C1015cWWcSHtWHtHScWW
3 IL_2QBG_0312QBG0.16020B23S rRNAG858G859U860A861G862*C915G916A917A918U919cWWcSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGUAG*CGAAG1
GGUAG*CAAAC1
GGUAG*CGAAU1
Non-Watson-Crick part of the motif
SequenceCounts
GUA*GAA2
GUA*AAA1

Release history

Release1.01.11.21.31.41.51.61.71.81.91.101.111.121.13
Date2013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_05723.1Only in the parent motif
IL_24022.2
Compare
IL_3V2F_027, IL_1S72_034, IL_2QBG_031IL_3V2F_098, IL_1S72_089, IL_2ZJR_094

Children motifs

Child motifCommon motif instancesOnly in IL_05723.1Only in the child motif
IL_05723.2
Compare
IL_1S72_034, IL_2QBG_031IL_3V2F_027IL_4NVV_029
Annotations
  • (3)
  • Basepair signature
    cWW-R-cSH-tWH-tHS-cWW
    Heat map statistics
    Min 0.16 | Avg 0.15 | Max 0.30
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