Motif IL_05920.1 Version IL_05920.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_093 | 1S72 | 0 | 1 | Bulged stacked bases (H) | 0 | LSU rRNA | U | 2732 | U | 2733 | * | A | 2746 | C | 2747 | G | 2748 | G | 2750 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UU*ACGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CGU | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_05920.1 | Only in the parent motif |
|---|---|---|---|
| IL_18916.1 Compare | IL_1S72_093 | IL_2QBG_086, IL_4CUX_087, IL_1KXK_003, IL_4QCN_081, IL_4CUV_067, IL_3U5F_086 |
Children motifs
This motif has no children motifs.- Annotations
-
- Bulged stacked bases (H) (1)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: