#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 13 14 151-152-143-43-114-65-137-108-912-13
1 IL_8C3A_0228C3A0.000021 LSU rRNAU551G552U553U554A555A557G558C559*G527A528A529G531U532G533G534ncWWtSHncSHtWHcWHcHWcWWcWWcSH
2 IL_5TBW_0205TBW0.157321 LSU rRNAU553A554U555U556A557A559G560C561*G531A532A533G535U536A537G538cWWtSHncSHtWHcWHcHWcWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
UGUUAUAGC*GAAUGUGG1
UAUUAUAGC*GAAUGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUUAUAG*AAUGUG1
AUUAUAG*AAUGUA1

Release history

Release3.803.813.823.833.843.853.863.873.883.89
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
    Heat map statistics
    Min 0.16 | Avg 0.08 | Max 0.16
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