Motif IL_07703.1 Version IL_07703.1 of this group appears in releases 3.80 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-4 | 3-11 | 4-6 | 5-13 | 7-10 | 8-9 | 12-13 | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8C3A_022 | 8C3A | 0.0000 | 2 | 1 | LSU rRNA | U | 551 | G | 552 | U | 553 | U | 554 | A | 555 | A | 557 | G | 558 | C | 559 | * | G | 527 | A | 528 | A | 529 | G | 531 | U | 532 | G | 533 | G | 534 | ncWW | tSH | ncSH | tWH | cWH | cHW | cWW | cWW | cSH |
2 | IL_5TBW_020 | 5TBW | 0.1573 | 2 | 1 | LSU rRNA | U | 553 | A | 554 | U | 555 | U | 556 | A | 557 | A | 559 | G | 560 | C | 561 | * | G | 531 | A | 532 | A | 533 | G | 535 | U | 536 | A | 537 | G | 538 | cWW | tSH | ncSH | tWH | cWH | cHW | cWW | cWW | cSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGUUAUAGC*GAAUGUGG | 1 |
UAUUAUAGC*GAAUGUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUUAUAG*AAUGUG | 1 |
AUUAUAG*AAUGUA | 1 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Heat map statistics
- Min 0.16 | Avg 0.08 | Max 0.16
Coloring options: