Motif IL_09129.2 Version IL_09129.2 of this group appears in releases 3.96 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 3-12 | 6-9 | 7-8 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_051 | 4LFB | 0.0000 | 0 | A | SSU rRNA | U | 1247 | A | 1248 | C | 1249 | A | 1250 | A | 1251 | A | 1252 | G | 1253 | * | C | 1284 | A | 1285 | A | 1286 | A | 1287 | A | 1288 | A | 1289 | G | 1290 | cWW | ntWH | tWH | tWW | cWW |
| 2 | IL_5J7L_054 | 5J7L | 0.2730 | 0 | AA | SSU rRNA | U | 1247 | A | 1248 | C | 1249 | A | 1250 | A | 1251 | A | 1252 | G | 1253 | * | C | 1284 | A | 1285 | U | 1286 | A | 1287 | A | 1288 | A | 1289 | G | 1290 | cWW | ntWH | tWH | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACAAAG*CAAAAAG | 1 |
| UACAAAG*CAUAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAAA*AAAAA | 1 |
| ACAAA*AUAAA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Heat map statistics
- Min 0.27 | Avg 0.14 | Max 0.27
Coloring options: