#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 131-132-52-126-96-127-87-118-109-11
1 IL_4V9F_1024V9F0.72391Minor groove platform related9 5S rRNAG21G22U23G25C26C27U28*A54U55A56A57G58C59cWWtSWncWBcWWcSWcWWcSWncSHncSH
2 IL_5TBW_3735TBW0.00000Minor groove platform relatedAS 5S rRNAG21A22A23A24G25C26A27*U53U54A55A56G57C58cWWncWWcSWcWWcSWncSHncSH
3 IL_8C3A_1448C3A0.08680Minor groove platform related3 5S rRNAG21A22A23A24G25C26A27*U53U54A55A56G57C58cWWcWWncSWcWWncSHncSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAAAGCA*UUAAGC2
GGUUGCCU*AUAAGC1
Non-Watson-Crick part of the motif
SequenceCounts
AAAGC*UAAG2
GUUGCC*UAAG1

Release history

Release3.803.813.823.833.843.853.863.873.88
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Minor groove platform related (3)
  • Basepair signature
    cWW-L-R-L-cSH-cSW-L-R-L-cWW-cWW
    Heat map statistics
    Min 0.09 | Avg 0.34 | Max 0.73
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