Motif IL_10389.1 Version IL_10389.1 of this group appears in releases 3.89 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4R4V_006 | 4R4V | 0.0000 | 0 | Isolated non-canonical cWW pair | A | VS ribozyme RNA | G | 749 | C | 750 | A | 751 | G | 752 | C | 753 | * | G | 724 | A | 725 | C | 726 | cWW | cWW | cWW |
| 2 | IL_8D29_007 | 8D29 | 0.6401 | 1 | J | RNA (34-MER) | C | 21 | C | 22 | C | 23 | U | 25 | G | 26 | * | C | 9 | A | 10 | G | 11 | ncWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAGC*GAC | 1 |
| CCCUUG*CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAG*A | 1 |
| CCUU*A | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Isolated non-canonical cWW pair (1)
- (1)
- Basepair signature
- cWW-L-cWW-L-cWW
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: