Motif IL_11344.2 Version IL_11344.2 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | 4-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_052 | 4LFB | 0.0000 | 5 | 180 degree turn | A | SSU rRNA | C | 1277 | A | 1279 | C | 1282 | * | G | 1255 | G | 1258 | cWW | cWW | ncSs |
| 2 | IL_5J7L_055 | 5J7L | 0.8213 | 5 | 180 degree turn | AA | SSU rRNA | C | 1277 | G | 1279 | C | 1282 | * | G | 1255 | G | 1258 | cWW | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAUC*GAUG | 1 |
| CGGACC*GAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAU*AU | 1 |
| GGAC*AA | 1 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (2)
- Basepair signature
- cWW-cSS-L-cWW
- Heat map statistics
- Min 0.82 | Avg 0.41 | Max 0.82
Coloring options: