Motif IL_12418.1 Version IL_12418.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_416 | 4V88 | 0.0000 | 3 | A6 | SSU rRNA | G | 616 | U | 617 | U | 618 | A | 622 | * | U | 1104 | C | 1105 | cWW | cWW | |
| 2 | IL_4V9F_045 | 4V9F | 0.8783 | 0 | Bulged stacked bases | 0 | LSU rRNA | A | 1286 | A | 1287 | U | 1288 | C | 1289 | * | G | 1269 | U | 1270 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAAA*UC | 1 |
| AAUC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAA* | 1 |
| AU* | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Bulged stacked bases (1)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.88 | Avg 0.44 | Max 0.88
Coloring options: