Motif IL_13434.1 Version IL_13434.1 of this group appears in releases 1.1 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 1-12 | 7-8 | 8-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_077 | 3U5F | 0 | 1 | 6 | 18S rRNA | G | 1488 | U | 1489 | C | 1490 | U | 1491 | A | 1492 | A | 1493 | C | 1494 | * | G | 1513 | U | 1514 | A | 1515 | U | 1517 | C | 1518 | cWW | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUAAC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUAA*UAAU | 1 |
Release history
| Release | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|
| Date | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_13434.1 | Only in the parent motif |
|---|---|---|---|
| IL_62499.5 Compare | IL_3U5F_077 | IL_2AW7_057, IL_1FJG_050 |
Children motifs
| Child motif | Common motif instances | Only in IL_13434.1 | Only in the child motif |
|---|---|---|---|
| IL_62499.7 Compare | IL_3U5F_077 | IL_2AW7_057, IL_1FJG_050 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-L-R-cSS-R-L-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: