Motif IL_15174.1 Version IL_15174.1 of this group appears in releases 3.80 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-13 | 5-7 | 7-10 | 8-9 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5TBW_124 | 5TBW | 0.0000 | 4 | 1 | LSU rRNA | U | 3179 | C | 3181 | G | 3182 | A | 3183 | A | 3184 | U | 3185 | A | 3187 | G | 3188 | * | C | 3204 | G | 3205 | C | 3206 | G | 3208 | A | 3210 | cWW | ncsS | cWW | cWW |
2 | IL_8C3A_132 | 8C3A | 0.1080 | 4 | 1 | LSU rRNA | U | 3149 | C | 3151 | G | 3152 | A | 3153 | A | 3154 | U | 3155 | A | 3157 | G | 3158 | * | C | 3169 | G | 3170 | C | 3171 | G | 3173 | A | 3175 | cWW | ncsS | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UACGAAUAAG*CGCUGAA | 1 |
UACGAAUAAG*CGCUGGA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
ACGAAUAA*GCUGA | 1 |
ACGAAUAA*GCUGG | 1 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Heat map statistics
- Min 0.11 | Avg 0.05 | Max 0.11
Coloring options: