Motif IL_15218.1 Version IL_15218.1 of this group appears in releases 3.77 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 1-13 | 11-12 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4PR6_001 | 4PR6 | 0.0000 | 0 | B | HDV RIBOZYME SELF-CLEAVED | C | 107 | A | 108 | U | 109 | G | 110 | G | 111 | U | 112 | C | 113 | C | 114 | C | 115 | A | 116 | G | 117 | * | C | 130 | G | 131 | cWW | |
2 | IL_7QR3_001 | 7QR3 | 0.2458 | 0 | C | chimpanzee CPEB3 ribozyme | C | 7 | A | 8 | C | 9 | A | 10 | G | 11 | C | 12 | A | 13 | G | 14 | A | 15 | A | 16 | G | 17 | * | C | 29 | G | 30 | ncWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAUGGUCCCAG*CG | 1 |
CACAGCAGAAG*CG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AUGGUCCCA* | 1 |
ACAGCAGAA* | 1 |
Release history
Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-L-R-L-R-L-R-L
- Heat map statistics
- Min 0.25 | Avg 0.12 | Max 0.25
Coloring options: