Motif IL_16218.3 Version IL_16218.3 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 5-6 | 8-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_283 | 8P9A | 0.0000 | 1 | AR | LSU rRNA | G | 1250 | A | 1251 | A | 1252 | U | 1253 | C | 1254 | * | G | 1234 | U | 1235 | G | 1237 | C | 1238 | cWW | ncWW | cWW | |
| 2 | IL_7A0S_039 | 7A0S | 0.8452 | 1 | X | LSU rRNA | C | 1087 | A | 1088 | C | 1089 | C | 1090 | C | 1091 | * | G | 1070 | U | 1071 | G | 1073 | G | 1074 | cWW | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUC*GUGGC | 1 |
| CACCC*GUUGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAU*UGG | 1 |
| ACC*UUG | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.85 | Avg 0.42 | Max 0.85
Coloring options: