Motif IL_16315.2 Version IL_16315.2 of this group appears in releases 4.1 to 4.12
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6MDZ_001 | 6MDZ | 0.7602 | 3 | E+C | RNA (23-mer) | U | 9 | U | 10 | C | 12 | C | 13 | * | G | 9 | A | 12 | A | 13 | cWW | cWW | |
| 2 | IL_8GLP_064 | 8GLP | 0.5902 | 0 | L5 | LSU rRNA | C | 1848 | U | 1849 | A | 1850 | G | 1851 | * | C | 1686 | U | 1687 | G | 1688 | cWW | cwW | cWW |
| 3 | IL_4WSM_372 | 4WSM | 0.0000 | 0 | 1K | tRNA | G | 46 | C | 47 | C | 48 | C | 49 | * | G | 55 | G | 56 | C | 57 | cWW | ncWW | ncWW |
| 4 | IL_9AXU_077 | 9AXU | 0.5671 | 0 | 2 | LSU rRNA | C | 2186 | A | 2187 | A | 2188 | C | 2189 | * | G | 2002 | G | 2003 | G | 2004 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUCC*GACAA | 1 |
| CUAG*CUG | 1 |
| GCCC*GGC | 1 |
| CAAC*GGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUC*ACA | 1 |
| UA*U | 1 |
| CC*G | 1 |
| AA*G | 1 |
Release history
| Release | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-L-cWW
- Heat map statistics
- Min 0.57 | Avg 0.53 | Max 0.90
Coloring options: