Motif IL_18382.1 Version IL_18382.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 8-9 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3HJW_001 | 3HJW | 0.0000 | 1 | D | RNA (58-MER) | G | 9 | A | 11 | A | 12 | C | 13 | C | 14 | G | 15 | C | 16 | G | 17 | * | U | 39 | U | 40 | C | 41 | G | 42 | C | 43 | U | 44 | C | 45 | C | 46 | cWW | cWW |
2 | IL_3HAX_001 | 3HAX | 0.6831 | 0 | E | H/ACA RNA | C | 9 | U | 10 | U | 11 | G | 12 | A | 13 | G | 14 | U | 15 | G | 16 | * | U | 42 | A | 43 | A | 44 | U | 45 | U | 46 | A | 47 | U | 48 | G | 49 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAAACCGCG*UUCGCUCC | 1 |
CUUGAGUG*UAAUUAUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AAACCGC*UCGCUC | 1 |
UUGAGU*AAUUAU | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.68 | Avg 0.34 | Max 0.68
Coloring options: