Motif IL_18472.5 Version IL_18472.5 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-5 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7A0S_103 | 7A0S | 0.7137 | 0 | Y | 5S rRNA | G | 25 | G | 26 | A | 27 | A | 28 | C | 29 | C | 30 | * | G | 58 | A | 59 | A | 60 | A | 61 | C | 62 | cWW | cWW | |
| 2 | IL_8B0X_172 | 8B0X | 0.0000 | 0 | b | 5S rRNA | G | 23 | G | 24 | U | 25 | C | 26 | C | 27 | C | 28 | * | G | 56 | A | 57 | A | 58 | A | 59 | C | 60 | cWW | tSW | cWW |
| 3 | IL_9DFE_111 | 9DFE | 0.1331 | 0 | 1B | 5S rRNA | G | 23 | G | 24 | A | 25 | A | 26 | C | 27 | C | 28 | * | G | 56 | A | 57 | A | 58 | A | 59 | C | 60 | cWW | tSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAACC*GAAAC | 2 |
| GGUCCC*GAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAC*AAA | 2 |
| GUCC*AAA | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.13 | Avg 0.35 | Max 0.73
Coloring options: