#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 121-122-113-64-54-115-11
1 IL_2HW8_0012HW80.00000Kink-turnB36-MERG10G11A12G13*C22G23C24G25A26A27A28C29cWWtSHntSscWWtsSncsS
2 IL_2VPL_0012VPL0.11310Kink-turnBFRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITEG10G11A12G13*C33G34A35G36A37A38A39C40cWWtSHntSscWWtsS
3 IL_2VPL_0042VPL0.12640DFRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITEG10G11A12G13*C33G34A35G36A37A38A39C40cWWtSHntSscWWtsSncsS

3D structures

Complete motif including flanking bases
SequenceCounts
GGAG*CGAGAAAC2
GGAG*CGCGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GA*GAGAAA2
GA*GCGAAA1

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_19669.1Only in the child motif
IL_93335.1
Compare
IL_2VPL_004, IL_2HW8_001IL_2VPL_001IL_1U63_003, IL_1U63_001
IL_48723.1
Compare
IL_2VPL_001IL_2VPL_004, IL_2HW8_001
Annotations
  • Kink-turn (2)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.05 | Avg 0.07 | Max 0.13
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