Motif IL_20358.1 Version IL_20358.1 of this group appears in releases 4.0 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-2 | 1-9 | 2-9 | 3-8 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1U6B_004 | 1U6B | 0.0000 | 0 | B | 197-MER | C | 96 | A | 97 | A | 98 | G | 99 | C | 100 | * | G | 119 | A | 120 | A | 121 | G | 122 | cWW | cWW | cWW | |||
| 2 | IL_8GLP_328 | 8GLP | 0.5213 | 0 | S2 | SSU rRNA | A | 545 | G | 546 | G | 547 | C | 548 | C | 549 | * | G | 535 | A | 536 | C | 537 | U | 538 | cSH | cWW | ncWW | ncWW | cWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGC*GAAG | 1 |
| AGGCC*GACU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAG*AA | 1 |
| GGC*AC | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-cWW
- Heat map statistics
- Min 0.52 | Avg 0.26 | Max 0.52
Coloring options: