Motif IL_21059.2 Version IL_21059.2 of this group appears in releases 0.4 to 0.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-3 | 2-6 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3OWZ_006 | 3OWZ | 1.0186 | 1 | B | Domain II of glycine riboswitch | C | 31 | G | 32 | A | 34 | G | 35 | * | C | 70 | A | 71 | G | 72 | cWW | tHS | cWW | ||
| 2 | IL_3F1H_003 | 3F1H | 0.9875 | 0 | A | 23S RRNA | C | 433 | U | 434 | C | 435 | C | 436 | * | G | 43 | A | 44 | G | 45 | cWW | cSH | ncWW | cWW | |
| 3 | IL_3OWZ_002 | 3OWZ | 0.9895 | 1 | A | Domain II of glycine riboswitch | C | 31 | G | 32 | A | 34 | G | 35 | * | C | 70 | A | 71 | G | 72 | cWW | tHS | cWW | ||
| 4 | IL_1FJG_003 | 1FJG | 0.0000 | 2 | A | SSU rRNA | C | 47 | U | 49 | A | 50 | G | 52 | * | U | 359 | A | 360 | G | 361 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAG*CAG | 2 |
| GAG*CUCC | 1 |
| CCUAAG*UAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*A | 2 |
| A*UC | 1 |
| CUAA*A | 1 |
Release history
| Release | 0.4 |
|---|---|
| Date | 2011-12-08 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_21059.2 | Only in the parent motif |
|---|---|---|---|
| IL_21059.1 Compare | IL_1FJG_003, IL_3OWZ_002, IL_3OWZ_006, IL_3F1H_003 | IL_2ZJR_081 |
Children motifs
| Child motif | Common motif instances | Only in IL_21059.2 | Only in the child motif |
|---|---|---|---|
| IL_95150.1 Compare | IL_3OWZ_006, IL_3OWZ_002 | IL_1FJG_003, IL_3F1H_003 | |
| IL_76618.1 Compare | IL_1FJG_003 | IL_3OWZ_002, IL_3OWZ_006, IL_3F1H_003 | IL_1XJR_001 |
Coloring options: