Motif IL_21254.1 Version IL_21254.1 of this group appears in releases 0.1 to 1.18

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5	break		6		7		8		9		10		11		12	1-12	2-10	3-11	4-9	5-6	6-10	7-8
1	IL_1FJG_011	1FJG	0	2		A	SSU rRNA	C	242	A	243	C	245	A	246	G	247	*	C	277	G	278	A	279	G	281	A	282	C	283	G	284	cWW	tWH	cWw	tHS	cWW	ncsS	ncSH

3D structures

Complete motif including flanking bases

Sequence	Counts
CAUCAG*CGACGACG	1

Non-Watson-Crick part of the motif

Sequence	Counts
AUCA*GACGAC	1

Release history

Release	0.1	0.2	0.3	0.4	0.5	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.17	1.18
Date	2011-12-08	2011-12-08	2011-12-08	2011-12-08	2011-12-08	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20	2014-09-04	2014-10-07
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations
Basepair signature: cWW-tWH-cWW-tHS-tSS-R-R-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

Help

Coloring options: Nucleotide numbers

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