#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 7 81-82-73-4
1 IL_1MFQ_0061MFQ0.00004A SRP RNAU181G182G187*C212A213A214A215A216cWWtSHcWW
2 IL_4BPP_0044BPP0.66322A18S RRNAG423A424A425*U41A42U43A45C47cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGAACCG*CAAAA1
GAA*UAUUAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GAACC*AAA1
A*AUUAA1

Release history

Release1.91.101.11
Date2013-12-072014-01-042014-02-01
StatusNew id, 2 parentsExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_22358.1Only in the parent motif
IL_06211.1
Compare
IL_4BPP_004IL_1MFQ_006IL_2AW7_003, IL_1FJG_003
IL_92280.1
Compare
IL_1MFQ_006IL_4BPP_004

Children motifs

Child motifCommon motif instancesOnly in IL_22358.1Only in the child motif
IL_06211.3
Compare
IL_4BPP_004IL_1MFQ_006IL_2AW7_003, IL_1FJG_003
IL_80714.1
Compare
IL_1MFQ_006IL_4BPP_004
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-R-R-cWW
    Heat map statistics
    Min 0.66 | Avg 0.33 | Max 0.66
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