Motif IL_28626.1 Version IL_28626.1 of this group appears in releases 0.1 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 3-12 | 4-5 | 5-11 | 6-10 | 8-9 | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1FJG_034 | 1FJG | 0 | 0 | 8x6 Sarcin-Ricin with inserted Y; G-bulge (H) | A | SSU rRNA | G | 887 | G | 888 | A | 889 | G | 890 | U | 891 | A | 892 | C | 893 | G | 894 | * | U | 905 | G | 906 | A | 907 | A | 908 | A | 909 | C | 910 | cWW | tSH | tHH | cSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GGAGUACG*UGAAAC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAGUAC*GAAA | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 |
---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_28626.1 | Only in the child motif |
---|---|---|---|
IL_95652.1 Compare | IL_1FJG_034 | IL_2AW7_041 |
- Annotations
-
- 8x6 Sarcin-Ricin with inserted Y; G-bulge (H) (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: