Motif IL_29949.1 Version IL_29949.1 of this group appears in releases 0.5 to 0.9
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-9 | 3-6 | 4-5 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3G78_003 | 3G78 | 0 | 2 | A | Group II catalytic intron D1-D4-1 | C | 76 | A | 77 | A | 78 | G | 79 | * | U | 103 | G | 104 | A | 105 | G | 108 | A | 109 | A | 110 | G | 111 | cWW | cSW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*UGAAGGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*GAAGGAA | 1 |
Release history
| Release | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 |
|---|---|---|---|---|---|
| Date | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_29949.1 | Only in the parent motif |
|---|---|---|---|
| IL_43956.2 Compare | IL_3G78_003 | IL_2QWY_004, IL_1S72_034 |
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-R-cSW-R-R-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: