Motif IL_30542.1 Version IL_30542.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_043 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 1163 | A | 1166 | G | 1167 | * | C | 1179 | U | 1180 | A | 1181 | C | 1182 | C | 1183 | cWW | ncWW | cWW |
| 2 | IL_6DCC_001 | 6DCC | 0.5302 | 0 | B | human 7SK RNA stem-loop 1 proximal methylated | A | 3 | U | 4 | G | 5 | * | C | 102 | C | 103 | G | 104 | C | 105 | U | 106 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAG*CUACC | 1 |
| AUG*CCGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGA*UAC | 1 |
| U*CGC | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.53 | Avg 0.27 | Max 0.53
Coloring options: