Motif IL_31290.1 Version IL_31290.1 of this group appears in releases 1.1 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-6 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_007 | 3U5F | 0 | 2 | 6 | SSU rRNA | U | 64 | A | 65 | A | 67 | G | 69 | * | U | 82 | G | 83 | A | 84 | A | 85 | A | 86 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUAAG*UGAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAA*GAA | 1 |
Release history
| Release | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|
| Date | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_31290.1 | Only in the parent motif |
|---|---|---|---|
| IL_06635.1 Compare | IL_3U5F_007 | IL_4A1B_075 |
Children motifs
| Child motif | Common motif instances | Only in IL_31290.1 | Only in the child motif |
|---|---|---|---|
| IL_06180.1 Compare | IL_3U5F_007 | IL_4A1B_075, IL_4BPP_007 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-tWH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: