Motif IL_33323.1 Version IL_33323.1 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-8 | 3-6 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_021 | 5J7L | 0.0000 | 0 | AA | SSU rRNA | C | 492 | A | 493 | G | 494 | A | 495 | A | 496 | G | 497 | * | C | 440 | A | 441 | G | 442 | cWW | ncwW | ncSH | cWW |
| 2 | IL_8D28_004 | 8D28 | 0.7131 | 0 | B | RNA (33-MER) | C | 20 | C | 21 | C | 22 | U | 23 | U | 24 | G | 25 | * | C | 9 | A | 10 | G | 11 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGAAG*CAG | 1 |
| CCCUUG*CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGAA*A | 1 |
| CCUU*A | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Heat map statistics
- Min 0.71 | Avg 0.36 | Max 0.71
Coloring options: