Motif IL_33761.2 Version IL_33761.2 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_107 | 8CRE | 0.4696 | 0 | Single bulged A (H) | 1 | LSU rRNA | C | 2597 | A | 2598 | C | 2599 | * | G | 2586 | G | 2587 | cWW | cWW |
| 2 | IL_4LFB_007 | 4LFB | 0.0000 | 1 | Multiple bulged bases | A | SSU rRNA | U | 129 | A | 130 | C | 131 | * | G | 231 | G | 232 | cWW | cWW |
| 3 | IL_1J9H_005 | 1J9H | 0.3503 | 0 | Other IL | A+B | RNA (9-mer) | G | 3 | U | 4 | C | 5 | * | G | 15 | CBR | 16 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAC*GG | 1 |
| UGAC*GG | 1 |
| GUC*G(CBR) | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 1 |
| GA* | 1 |
| U* | 1 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (1)
- Multiple bulged bases (1)
- Single bulged A (H) (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.35 | Avg 0.35 | Max 0.76
Coloring options: