Motif IL_33812.1 Version IL_33812.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 3-9 | 4-5 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7A0S_104 | 7A0S | 0.5363 | 0 | Y | 5S rRNA | C | 32 | C | 33 | C | 34 | C | 35 | * | G | 51 | G | 52 | G | 53 | U | 54 | C | 55 | G | 56 | cWW | ncWB | cWW | ||
| 2 | IL_3NDB_002 | 3NDB | 0.0000 | 1 | M | SRP RNA | G | 128 | U | 129 | C | 130 | C | 131 | * | G | 247 | G | 248 | G | 249 | U | 251 | G | 252 | C | 253 | cWW | ncSW | cWW | ||
| 3 | IL_3CUL_001 | 3CUL | 0.5229 | 0 | C | RNA (92-MER) | C | 22 | A | 23 | G | 24 | G | 25 | * | U | 44 | A | 45 | U | 46 | U | 47 | G | 48 | G | 49 | cWW | cWW | cWB | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCCC*GGGUCG | 1 |
| GUCC*GGGGUGC | 1 |
| CAGG*UAUUGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC*GGUC | 1 |
| UC*GGGUG | 1 |
| AG*AUUG | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-R-R-R-L-cWW
- Heat map statistics
- Min 0.52 | Avg 0.37 | Max 0.62
Coloring options: