#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 71-73-54-75-6
1 IL_4M4O_0054M4O0.00002Major groove minor groove platform with intercalation; mini C-loopBRNA (59-MER)G28U29U30A31C32*G36C39cWWncSHcWScWW
2 IL_4M6D_0144M6D0.11382Major groove minor groove platform with intercalation; mini C-loopHaptamerG28U29U30A31C32*G36C39cWWncSHcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUUAC*GUUC2
Non-Watson-Crick part of the motif
SequenceCounts
UUA*UU2

Release history

Release1.101.111.121.131.141.151.171.18
Date2014-01-042014-02-012014-03-012014-03-292014-04-272014-06-202014-09-042014-10-07
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Major groove minor groove platform with intercalation; mini C-loop (2)
  • Basepair signature
    cWW-cSH-L-cWS-cWW
    Heat map statistics
    Min 0.11 | Avg 0.06 | Max 0.11
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