Motif IL_34635.2 Version IL_34635.2 of this group appears in releases 0.3 to 0.3
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3F1H_106 | 3F1H | 0.8564 | 0 | A | 23S RRNA | G | 2843 | G | 2844 | G | 2845 | * | C | 2871 | G | 2872 | A | 2873 | C | 2874 | cWW | ncWW | |
2 | IL_1LNG_001 | 1LNG | 0.0000 | 0 | B | SRP S RNA | G | 152 | A | 153 | G | 154 | * | U | 175 | A | 176 | A | 177 | C | 178 | cWW | cWW | |
3 | IL_3BNL_003 | 3BNL | 0.7705 | 0 | B+A | A site of bacterial ribosome | C | 6 | A | 7 | C | 8 | * | G | 15 | A | 16 | A | 17 | G | 18 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GGG*CGAC | 1 |
GAG*UAAC | 1 |
CAC*GAAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
A*AA | 2 |
G*GA | 1 |
Release history
Release | 0.3 |
---|---|
Date | 2011-12-08 |
Status | Updated, 2 parents |
Parent motifs
Parent motif | Common motif instances | Only in IL_34635.2 | Only in the parent motif |
---|---|---|---|
IL_34635.1 Compare | IL_3F1H_106, IL_3BNL_003 | IL_1LNG_001 | IL_3F1H_030 |
IL_35887.1 Compare | IL_1LNG_001 | IL_3F1H_106, IL_3BNL_003 |
Children motifs
Child motif | Common motif instances | Only in IL_34635.2 | Only in the child motif |
---|---|---|---|
IL_71234.1 Compare | IL_3F1H_106, IL_1LNG_001 | IL_3BNL_003 | IL_2ZJR_101, IL_2QEK_002 |
IL_20017.1 Compare | IL_3BNL_003 | IL_3F1H_106, IL_1LNG_001 | IL_3MUR_001, IL_3F1H_030 |
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