#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 71-72-63-4
1 IL_3F1H_1063F1H0.85640A23S RRNAG2843G2844G2845*C2871G2872A2873C2874cWWncWW
2 IL_1LNG_0011LNG0.00000B SRP S RNAG152A153G154*U175A176A177C178cWWcWW
3 IL_3BNL_0033BNL0.77050B+AA site of bacterial ribosomeC6A7C8*G15A16A17G18cWWcwWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGG*CGAC1
GAG*UAAC1
CAC*GAAG1
Non-Watson-Crick part of the motif
SequenceCounts
A*AA2
G*GA1

Release history

Release0.3
Date2011-12-08
StatusUpdated, 2 parents

Parent motifs

Parent motifCommon motif instancesOnly in IL_34635.2Only in the parent motif
IL_34635.1
Compare
IL_3F1H_106, IL_3BNL_003IL_1LNG_001IL_3F1H_030
IL_35887.1
Compare
IL_1LNG_001IL_3F1H_106, IL_3BNL_003

Children motifs

Child motifCommon motif instancesOnly in IL_34635.2Only in the child motif
IL_71234.1
Compare
IL_3F1H_106, IL_1LNG_001IL_3BNL_003IL_2ZJR_101, IL_2QEK_002
IL_20017.1
Compare
IL_3BNL_003IL_3F1H_106, IL_1LNG_001IL_3MUR_001, IL_3F1H_030
Annotations
  • (3)
  • Basepair signature
    Heat map statistics
    Min 0.77 | Avg 0.59 | Max 1.02
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