#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15break 16 17 18 19 201-202-192-206-715-16
1 IL_4N0T_0024N0T0.23586BU6 snRNAG39A40A41C43A44A45U46A47C48G50A51G52A53A56A59*U88U89U90A91C92cWWtWWncSHcWW
2 IL_6ASO_0016ASO0.00006I U6 snRNAG39A40A41C43A44A45U46A47C48G50A51G52A53A56A59*U88U89U90A91C92cWWtWWntWWncSHcWW
3 IL_5VSU_0015VSU0.16656I U6 snRNAG39A40A41C43A44A45U46A47C48G50A51G52A53A56A59*U88U89U90A91C92tWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAACAAUACAGAGAUGAUCA*UUUAC3
Non-Watson-Crick part of the motif
SequenceCounts
AAACAAUACAGAGAUGAUC*UUA3

Release history

Release3.863.873.883.89
Date2024-07-172024-08-142024-09-112024-10-09
StatusUpdated, 1 parentExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R
    Heat map statistics
    Min 0.17 | Avg 0.15 | Max 0.25
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