Motif IL_34739.3 Version IL_34739.3 of this group appears in releases 3.86 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 2-20 | 6-7 | 15-16 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4N0T_002 | 4N0T | 0.2358 | 6 | B | G | 39 | A | 40 | A | 41 | C | 43 | A | 44 | A | 45 | U | 46 | A | 47 | C | 48 | G | 50 | A | 51 | G | 52 | A | 53 | A | 56 | A | 59 | * | U | 88 | U | 89 | U | 90 | A | 91 | C | 92 | cWW | tWW | ncSH | cWW | |
| 2 | IL_6ASO_001 | 6ASO | 0.0000 | 6 | I | G | 39 | A | 40 | A | 41 | C | 43 | A | 44 | A | 45 | U | 46 | A | 47 | C | 48 | G | 50 | A | 51 | G | 52 | A | 53 | A | 56 | A | 59 | * | U | 88 | U | 89 | U | 90 | A | 91 | C | 92 | cWW | tWW | ntWW | ncSH | cWW |
| 3 | IL_5VSU_001 | 5VSU | 0.1665 | 6 | I | G | 39 | A | 40 | A | 41 | C | 43 | A | 44 | A | 45 | U | 46 | A | 47 | C | 48 | G | 50 | A | 51 | G | 52 | A | 53 | A | 56 | A | 59 | * | U | 88 | U | 89 | U | 90 | A | 91 | C | 92 | cWW | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACAAUACAGAGAUGAUCA*UUUAC | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAACAAUACAGAGAUGAUC*UUA | 3 |
Release history
| Release | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R
- Heat map statistics
- Min 0.17 | Avg 0.15 | Max 0.25
Coloring options: