#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 111-112-103-104-95-86-7
1 IL_4V88_3934V880.08490A6 SSU rRNAU117U118A119U120U121U122*A295U296U297C298A299cWWntHScWwcWwcWW
2 IL_8C3A_4018C3A0.00000CM SSU rRNAU117U118A119U120U121U122*A293U294U295C296A297cWWntHScWwcWwcWW
3 IL_1L9A_0061L9A0.63331Bsignal recognition particle RNA S domainU181G182A184C185C186G187*C212A213A214A215A216cWWntHHncWWacWW
4 IL_4V88_3864V880.86070Triple sheared relatedA6 SSU rRNAU466G467A468C469A470A471*U37C38A39A40A41cWWtSHcWWcWW
5 IL_8C3A_3948C3A0.82530Triple sheared relatedCM SSU rRNAU464G465A466C467A468A469*U37C38A39A40A41cWWtSHtHScWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUAUUU*AUUCA2
UGACAA*UCAAA2
UGAACCG*CAAAA1
Non-Watson-Crick part of the motif
SequenceCounts
UAUU*UUC2
GACA*CAA2
GAACC*AAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Triple sheared related (2)
  • Basepair signature
    cWW-L-R-L-R-L-cWW-cWW
    Heat map statistics
    Min 0.08 | Avg 0.49 | Max 0.86
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