Motif IL_38319.1 Version IL_38319.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 4-5 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8D28_003 | 8D28 | 0.0000 | 1 | B | RNA (33-MER) | G | 4 | A | 5 | U | 6 | A | 7 | C | 8 | * | G | 26 | A | 28 | G | 29 | C | 30 | cWW | cWW | ntSH | cSH | cWW |
| 2 | IL_8DK7_001 | 8DK7 | 0.2408 | 1 | C | RNA (34-MER) | G | 4 | A | 5 | U | 6 | A | 7 | C | 8 | * | G | 27 | A | 29 | G | 30 | C | 31 | ncWW | cWW | ntSH | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAC*GCAGC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUA*CAG | 2 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-cSH-cWW
- Heat map statistics
- Min 0.24 | Avg 0.12 | Max 0.24
Coloring options: