#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 81-82-65-6
1 IL_4A1B_1194A1B0.00001126S RRNAU3036A3037A3038U3039U3040*A3080C3082A3083cWWcWW
2 IL_3U5H_1233U5H0.34951525S rRNAU3047A3048A3049U3050U3051*A3091C3093A3094cWWtHHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAAUU*ACCA2
Non-Watson-Crick part of the motif
SequenceCounts
AAU*CC2

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_39355.1Only in the parent motif
IL_98421.3
Compare
IL_3U5H_123IL_4A1B_119IL_1FJG_013, IL_2AW7_016
IL_34868.1
Compare
IL_4A1B_119IL_3U5H_123

Children motifs

Child motifCommon motif instancesOnly in IL_39355.1Only in the child motif
IL_64213.1
Compare
IL_4A1B_119IL_3U5H_123
IL_98421.5
Compare
IL_3U5H_123IL_4A1B_119IL_1FJG_013, IL_2AW7_016
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-L-L-cWW
    Heat map statistics
    Min 0.35 | Avg 0.17 | Max 0.35
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