Motif IL_39753.2 Version IL_39753.2 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 3-11 | 4-5 | 6-9 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_078 | 8C3A | 0.0000 | 0 | 1 | LSU rRNA | U | 1733 | C | 1734 | U | 1735 | U | 1736 | A | 1737 | U | 1738 | G | 1739 | * | U | 1698 | U | 1699 | A | 1700 | U | 1701 | C | 1702 | A | 1703 | cWW | ncWB | ntWH | cSH | cWw | cWW |
| 2 | IL_5TBW_072 | 5TBW | 0.1246 | 0 | 1 | LSU rRNA | U | 1737 | C | 1738 | U | 1739 | U | 1740 | A | 1741 | U | 1742 | G | 1743 | * | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | cWW | ncWB | ntWH | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUAUG*UUAUCA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUAU*UAUC | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-tWH-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.12 | Avg 0.06 | Max 0.12
Coloring options: