Motif IL_41027.1 Version IL_41027.1 of this group appears in releases 1.14 to 1.17
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-4 | 4-9 | 5-8 | 6-7 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1VW3_025 | 1VW3 | 0 | 0 | A | 21S ribosomal RNA | U | 780 | G | 781 | G | 782 | U | 783 | A | 784 | C | 785 | * | G | 841 | A | 842 | A | 843 | A | 844 | U | 845 | A | 846 | cWW | cWB | cSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGGUAC*GAAAUA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GGUA*AAAU | 1 |
Release history
Release | 1.14 | 1.15 | 1.17 |
---|---|---|---|
Date | 2014-04-27 | 2014-06-20 | 2014-09-04 |
Status | New id, no parents | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_41027.1 | Only in the child motif |
---|---|---|---|
IL_37481.1 Compare | IL_1VW3_025 | IL_4W21_065 |
- Annotations
-
- (1)
- Basepair signature
- cWW-bif-R-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: