Motif IL_43644.1 Version IL_43644.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_327 | 5J7L | 0.0000 | 0 | Other IL | DA | LSU rRNA | C | 2103 | C | 2104 | U | 2105 | U | 2106 | * | A | 2183 | A | 2184 | U | 2185 | G | 2186 | cWW | ncWW | ntHS | ncWW |
| 2 | IL_5EW4_001 | 5EW4 | 0.3180 | 0 | Tandem non-canonical cWW pairs | B+A | RNA (22-mer) | C | 14 | C | 15 | C | 16 | G | 17 | * | C | 8 | C | 9 | C | 10 | G | 11 | cWW | cWw | cBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUU*AAUG | 1 |
| CCCG*CCCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CU*AU | 1 |
| CC*CC | 1 |
- Annotations
-
- Tandem non-canonical cWW pairs (1)
- Other IL (1)
- Basepair signature
- cWW-cWW-L-R-cWW
- Heat map statistics
- Min 0.32 | Avg 0.16 | Max 0.32
Coloring options: