Motif IL_45735.1 Version IL_45735.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 5-8 | 6-7 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5J7L_354 | 5J7L | 0.0000 | 0 | tHS double platform | DA | LSU rRNA | U | 2847 | G | 2848 | U | 2849 | A | 2850 | A | 2851 | G | 2852 | * | U | 2865 | U | 2866 | G | 2867 | A | 2868 | G | 2869 | cWW | tSH | tHH | cWW |
2 | IL_8VTW_109 | 8VTW | 0.0672 | 0 | tHS double platform (H) | 1A | LSU rRNA | U | 2847 | G | 2848 | U | 2849 | A | 2850 | A | 2851 | G | 2852 | * | U | 2865 | U | 2866 | G | 2867 | A | 2868 | G | 2869 | cWW | tSH | tHH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGUAAG*UUGAG | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUAA*UGA | 2 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tHS double platform (1)
- tHS double platform (H) (1)
- Basepair signature
- cWW-tSH-L-R-L-tHH-cWW
- Heat map statistics
- Min 0.07 | Avg 0.03 | Max 0.07
Coloring options: