1 IL_4Y4O_202 4Y4O 0.7874 1 2A LSU rRNA C 844 G 845 C 846 * G 931 A 933 G 934 cWW cWW
2 IL_2W2H_002 2W2H 0.4464 0 Isolated cWH basepair R RNA (21-mer) G 17 U 18 C 19 * G 8 A 9 U 10 ncWW ncWW cWW
3 IL_1M5K_004 1M5K 0.5288 0 Isolated cWH basepair B RNA HAIRPIN RIBOZYME G 72 G 73 G 74 * C 79 U 80 U 81 ncWW cWW
4 IL_4J50_007 4J50 0.5647 0 Isolated cWH basepair B+A RNA (19-mer) C 13||||3_555 A 14||||3_555 G 15||||3_555 * C 7||||3_555 A 8||||3_555 G 9||||3_555 cWW cWW
5 IL_4J50_004 4J50 0.5647 0 Isolated cWH basepair B+A RNA (19-mer) C 13||||2_555 A 14||||2_555 G 15||||2_555 * C 7||||2_555 A 8||||2_555 G 9||||2_555 cWW cWW
6 IL_4J50_001 4J50 0.5647 0 Isolated cWH basepair B+A RNA (19-mer) C 13 A 14 G 15 * C 7 A 8 G 9 cWW cWW
7 IL_4J50_006 4J50 0.5646 0 Isolated cWH basepair A+B RNA (19-mer) C 13||||2_555 A 14||||2_555 G 15||||2_555 * C 7||||2_555 A 8||||2_555 G 9||||2_555 cWW cWW
8 IL_4J50_009 4J50 0.5646 0 Isolated cWH basepair A+B RNA (19-mer) C 13||||3_555 A 14||||3_555 G 15||||3_555 * C 7||||3_555 A 8||||3_555 G 9||||3_555 cWW cWW
9 IL_4J50_003 4J50 0.5646 0 Isolated cWH basepair A+B RNA (19-mer) C 13 A 14 G 15 * C 7 A 8 G 9 cWW cWW
10 IL_2H1M_002 2H1M 0.5290 0 Isolated cWH basepair A+B RNA (16-mer) A 5 G 6 U 7 * A 26 A 27 U 28 cWW ncHW cWW
11 IL_2H1M_003 2H1M 0.5238 0 Isolated cWH basepair B+A RNA (16-mer) A 21 G 22 U 23 * A 10 A 11 U 12 cWW ncHW cWW
12 IL_4WZM_001 4WZM 0.5653 0 Isolated cWH basepair B+C RNA template + RNA primer G 906 G 907 C 908 * G 917 C 918 C 919 cWW ncHW cWW
13 IL_2ET8_003 2ET8 0.6870 1 Decoding loop related A+B RNA (22-mer) G 15 A 17 G 18 * C 29 A 30 C 31 cWW cWW
14 IL_4V88_448 4V88 0.6500 0 A6 SSU rRNA A 1234 C 1235 A 1236 * U 1249 U 1250 U 1251 cWW cWW
15 IL_4PKD_001 4PKD 0.5490 1 Isolated non-canonical cWW with bulges V U1 snRNA stem-loops 1 and 2 (55-MER) G 106 U 107 U 108 * A 86 U 87 C 89 cWW cWw cWW
16 IL_4V8Q_188 4V8Q 0.3486 0 BY SsrA C 20 A 21 G 22 * U 56 U 57 G 58 cWW ncWW ncWW
17 IL_4IOA_078 4IOA 0.4321 0 Isolated non-canonical cWW pair (H) X LSU rRNA C 2068 U 2069 G 2070 * U 2211 U 2212 G 2213 cWW cwW cWW
18 IL_5J7L_326 5J7L 0.4408 0 Isolated non-canonical cWW pair DA LSU rRNA C 2232 U 2233 G 2234 * U 2085 U 2086 G 2087 cWW cwW cWW
19 IL_4Y4O_256 4Y4O 0.4315 0 2A LSU rRNA C 2085 U 2086 G 2087 * U 2232 U 2233 G 2234 cWW cwW cWW
20 IL_4V88_424 4V88 0.4372 0 Isolated non-canonical cWW pair A6 SSU rRNA A 799 U 800 G 801 * U 748 U 749 U 750 cWW cwW cWW
21 IL_4WF9_095 4WF9 0.5794 2 Isolated non-canonical cWW with bulges X LSU rRNA G 2601 C 2602 G 2605 * C 2537 U 2538 C 2539 cWW ncWW cWW
22 IL_5J7L_340 5J7L 0.6089 2 Isolated non-canonical cWW with bulges DA LSU rRNA G 2574 C 2575 G 2578 * C 2510 U 2511 C 2512 cWW ncWW cWW
23 IL_4Y4O_272 4Y4O 0.6100 2 Isolated non-canonical cWW with bulges (H) 2A LSU rRNA G 2574 C 2575 G 2578 * C 2510 U 2511 C 2512 cWW ncWW cWW
24 IL_4IOA_091 4IOA 0.6309 2 Isolated non-canonical cWW with bulges (H) X LSU rRNA G 2553 C 2554 G 2557 * C 2489 U 2490 C 2491 cWW ncWW cWW
25 IL_4V8P_270 4V8P 0.6786 2 Isolated non-canonical cWW with bulges (H) D1 LSU rRNA G 2931 U 2932 G 2935 * C 2867 U 2868 C 2869 cWW cwW cWW
26 IL_5TBW_108 5TBW 0.6451 2 Isolated non-canonical cWW with bulges 1 LSU rRNA G 2943 U 2944 G 2947 * C 2879 U 2880 C 2881 cWW cwW cWW
27 IL_3KTW_002 3KTW 0.6100 1 Isolated non-canonical cWW with bulges C SRP RNA A 177 U 178 C 180 * G 152 G 153 U 154 cWW ncSH cWW ncWW
28 IL_4V9F_097 4V9F 0.6269 1 Isolated non-canonical cWW with bulges 0 LSU rRNA G 2900 C 2901 C 2903 * G 2855 A 2856 C 2857 cWW ncWW cWW
29 IL_5ML7_010 5ML7 0.5293 1 Isolated non-canonical cWW with bulges B 23S ribosomal RNA G 2196 C 2197 A 2199 * U 2181 A 2182 C 2183 cWW cWW cWW
30 IL_4IOA_104 4IOA 0.6302 1 Y 5S rRNA G 66 C 67 G 69 * C 19 A 20 C 21 cWW cWW cWW
31 IL_1U6B_001 1U6B 0.5531 1 Isolated non-canonical cWW pair B 197-MER G 19 C 20 G 22 * C 29 A 30 C 31 cWW ncWW cWW
32 IL_4V8P_219 4V8P 0.5036 1 Isolated cWS basepair (H) D1 LSU rRNA A 1454 U 1456 G 1457 * C 1403 G 1404 U 1405 cWW cSW cWW
33 IL_5TBW_057 5TBW 0.5108 1 Isolated cWS basepair 1 LSU rRNA A 1428 U 1430 G 1431 * C 1376 G 1377 U 1378 cWW cSW cWW
34 IL_4K31_002 4K31 0.4458 1 Isolated non-canonical cWW pair C+B RNA (23-mer) A 16 A 17 G 19 * C 7 G 8 U 9 cWW cWW cWW
35 IL_4K31_003 4K31 0.4371 1 Isolated non-canonical cWW pair B+C RNA (23-mer) A 16 A 17 G 19 * C 7 G 8 U 9 cWW cWW cWW
36 IL_4V8P_184 4V8P 0.4730 1 D1 LSU rRNA C 577 G 578 G 580 * C 589 A 590 G 591 cWW cWW
37 IL_5UNE_004 5UNE 0.4365 0 Isolated non-canonical cWW pair B+A RNA (47-MER) C 27 A 28 G 29 * U 16 A 17 G 18 cWW cwW cWW
38 IL_4RUM_001 4RUM 0.4559 1 Isolated non-canonical cWW pair A NiCo riboswitch RNA G 13 A 14 C 16 * G 88 A 89 C 90 cWW cwW cWW
39 IL_4V8P_181 4V8P 0.4095 0 D1 LSU rRNA A 610 A 611 C 612 * G 555 A 556 U 557 cWW ncwW cWW
40 IL_4V8P_211 4V8P 0.3667 0 D1 LSU rRNA U 1150 U 1151 U 1152 * A 1160 G 1161 A 1162 cWW ncWW cWW
41 IL_1Y27_001 1Y27 0.3131 0 Isolated non-canonical cWW pair X Purine riboswitch U 25 C 26 G 27 * C 43 A 44 A 45 cWW cWW cWW
42 IL_4R0D_016 4R0D 0.2829 0 A Group II catalytic intron U 442 U 443 G 444 * C 456 G 457 A 458 cWW ncWW cWW
43 IL_4V5O_094 4V5O 0.3779 0 Isolated non-canonical cWW contact (H) BA SSU rRNA U 156 G 157 G 158 * C 144 G 145 A 146 cWW cWW
44 IL_4V88_406 4V88 0.5268 0 Isolated near basepair A6 SSU rRNA C 411 A 412 U 413 * A 420 A 421 G 422 cWW cWW
45 IL_5H1K_001 5H1K 0.3976 0 Isolated non-canonical cWW pair D+C U4 snRNA (13-mer) G 7 A 8 C 9 * G 7 A 8 C 9 cWW cWW
46 IL_4V9F_077 4V9F 0.4057 0 Isolated near basepair 0 LSU rRNA G 2237 A 2238 C 2239 * G 2136 A 2137 C 2138 cWW ncWW
47 IL_4R0D_018 4R0D 0.3201 0 Isolated non-canonical cWW pair A Group II catalytic intron A 551 G 552 C 553 * G 580 U 581 U 582 cWW ncWW cWW
48 IL_2PWT_001 2PWT 0.2544 0 Isolated non-canonical cWW pair B+A 22-mer of the ribosomal decoding site G 40 U 41 C 42 * G 4 U 5 C 6 cWW cWw cWW
49 IL_4V8P_157 4V8P 0.3029 1 Isolated non-canonical cWW pair (H) C3 5S rRNA C 92 G 93 C 94 * G 82 G 83 G 85 cWW cWW
50 IL_4V9K_064 4V9K 0.2471 0 Isolated non-canonical cWW pair AW tRNA C 50 A 51 G 52 * C 62 C 63 G 64 cWW ncWWa cWW
51 IL_4V5O_146 4V5O 0.2668 0 Isolated cWH basepair (H) BA SSU rRNA U 1262 G 1263 G 1264 * C 1295 G 1296 A 1297 cWW cWW
52 IL_4J50_008 4J50 0.2376 0 B+A RNA (19-mer) C 10||||3_555 A 11||||3_555 G 12||||3_555 * C 10||||3_555 A 11||||3_555 G 12||||3_555 cWW cWW
53 IL_4J50_002 4J50 0.2376 0 Isolated non-canonical cWW pair B+A RNA (19-mer) C 10 A 11 G 12 * C 10 A 11 G 12 cWW cWW
54 IL_4J50_005 4J50 0.2376 0 B+A RNA (19-mer) C 10||||2_555 A 11||||2_555 G 12||||2_555 * C 10||||2_555 A 11||||2_555 G 12||||2_555 cWW cWW
55 IL_4V5O_135 4V5O 0.2729 0 BA SSU rRNA C 1595 C 1596 G 1597 * C 1126 A 1127 G 1128 cWW cWWa cWW
56 IL_4V88_419 4V88 0.3010 0 Isolated non-canonical cWW pair A6 SSU rRNA C 646 G 647 G 648 * C 686 G 687 G 688 cWW cWW
57 IL_5J7L_273 5J7L 0.3076 0 Isolated non-canonical cWW pair DA LSU rRNA A 905 U 906 G 907 * U 870 U 871 U 872 cWW cWw cWW
58 IL_4V88_433 4V88 0.2806 0 Isolated non-canonical cWW pair A6 SSU rRNA U 917 U 918 A 919 * U 893 U 894 G 895 ncWW cWw cWW
59 IL_3ICQ_003 3ICQ 0.2706 0 E RNA (62-MER) G 3 G 4 A 5 * U 68 U 69 C 70 cWW ncWW cWW
60 IL_1NBS_006 1NBS 0.4069 0 B RNase P class B G 125 G 126 C 127 * G 116 U 117 C 118 cWW ncWW cWW
61 IL_4R0D_003 4R0D 0.4450 0 A Group II catalytic intron U 78 G 79 C 80 * G 99 U 100 G 101 ncWW cWW cWW
62 IL_4KYY_002 4KYY 0.5321 0 Isolated non-canonical cWW pair B+A RNA 17-mer U 8 U 9 G 10 * U 8 U 9 G 10 cWW cWW
63 IL_4V88_470 4V88 0.4546 0 Isolated non-canonical cWW pair A6 SSU rRNA U 1665 U 1666 A 1667 * U 1734 U 1735 G 1736 cWW cWW
64 IL_4IOA_109 4IOA 0.5063 0 Isolated non-canonical cWW pair (H) Y 5S rRNA U 82 C 83 G 84 * C 97 C 98 G 99 cWW cBW cWW
65 IL_3GLP_001 3GLP 0.4253 0 A+B RNA (8-mer) C 2 U 3 G 4 * C 5||A U 6 G 7 cWW cWW
66 IL_4WF9_055 4WF9 0.3804 0 X LSU rRNA G 1465 G 1466 G 1467 * C 1622 U 1623 C 1624 cWW cWW
67 IL_5M0H_002 5M0H 0.4789 2 Multiple bulged bases, near cWW A ASH1 E3 (42 nt-TL/TLR) G 8 U 11 C 12 * G 34 A 35 C 36 ncWW cWW cWW
68 IL_4V5O_148 4V5O 0.4762 1 Isolated non-canonical cWW pair (H) BA SSU rRNA C 1311 G 1313 C 1314 * G 1353 A 1354 G 1355 cWW ncWW cWW
69 IL_4V88_455 4V88 0.3942 1 Isolated non-canonical cWW pair A6 SSU rRNA C 1339 A 1341 C 1342 * G 1383 A 1384 G 1385 cWW ncwW cWW
70 IL_4IOA_044 4IOA 0.4143 0 Isolated non-canonical cWW pair (H) X LSU rRNA C 1252 C 1253 G 1254 * C 1218 C 1219 G 1220 cWW ncBW cWW
71 IL_4V8P_170 4V8P 0.4323 0 D1 LSU rRNA C 422 U 423 G 424 * C 656 U 657 G 658 cWW cWW
72 IL_5TBW_008 5TBW 0.3715 0 Isolated non-canonical cWW pair 1 LSU rRNA C 125 U 126 G 127 * C 141 C 142 G 143 cWW cWW cWW
73 IL_4V9F_023 4V9F 0.3205 0 Isolated non-canonical cWW pair 0 LSU rRNA C 899 U 900 G 901 * C 763 C 764 G 765 cWW cWW cWW
74 IL_4V8P_191 4V8P 0.3087 0 D1 LSU rRNA C 963 U 964 G 965 * C 828 C 829 G 830 cWW cWW cWW
75 IL_5TBW_027 5TBW 0.2903 0 Isolated non-canonical cWW pair 1 LSU rRNA C 938 U 939 G 940 * C 803 C 804 G 805 cWW cWW cWW
76 IL_4WF9_020 4WF9 0.2466 0 Isolated non-canonical cWW pair X LSU rRNA C 851 U 852 G 853 * C 717 C 718 G 719 cWW cWW cWW
77 IL_4IOA_013 4IOA 0.2636 0 X LSU rRNA C 819 U 820 A 821 * U 685 C 686 G 687 cWW cWW cWW
78 IL_5J7L_259 5J7L 0.2584 0 Isolated non-canonical cWW pair DA LSU rRNA C 806 U 807 G 808 * C 672 C 673 G 674 cWW cWW cWW
79 IL_4Y4O_194 4Y4O 0.2621 0 2A LSU rRNA C 806 U 807 G 808 * C 672 C 673 G 674 cWW cWW cWW
80 IL_2Q1R_002 2Q1R 0.2344 0 A RNA (12-mer) C 1003||||2_755 G 1004||||2_755 A 1005||||2_755 * U 1008 A 1009 G 1010 cWW cWW cWW
81 IL_4WF9_083 4WF9 0.2153 0 Isolated non-canonical cWW pair X LSU rRNA C 2111 C 2112 U 2113 * A 2260 A 2261 G 2262 cWW ncWWa cWW
82 IL_4V5O_164 4V5O 0.3790 0 BA SSU rRNA C 1644 C 1645 U 1646 * A 1679 A 1680 G 1681 cWW cWW
83 IL_3RW6_004 3RW6 0.3794 0 Isolated non-canonical cWW pair H constitutive transport element(CTE)of Mason-Pfizer monkey virus RNA C 33 U 34 G 35 * C 24 C 25 G 26 cWW cWW cWW
84 IL_1RPU_001 1RPU 0.3226 0 Isolated non-canonical cWW pair D+C RNA (21-mer) U 9||A C 10||A A 11||A * U 9||A C 10||A A 11||A cWW ncBW cWW
85 IL_3GLP_002 3GLP 0.3226 0 A+B RNA (8-mer) C 5 U 6 G 7 * C 2||A U 3||A G 4 ncWw cWW
86 IL_4V5O_084 4V5O 0.3048 0 BA SSU rRNA U 596 U 597 A 598 * U 21 U 22 A 23 cWW cWw cWW
87 IL_3GM7_001 3GM7 0.2003 0 Isolated non-canonical cWW pair G+H RNA (18-mer) C 1 U 2 G 3 * C 16 U 17 G 18 cWW cWW
88 IL_3GM7_002 3GM7 0.2408 0 Isolated non-canonical cWW pair H+G RNA (18-mer) C 13 U 14 G 15 * C 4 U 5 G 6 cWW cWW
89 IL_3GM7_004 3GM7 0.2674 0 Isolated non-canonical cWW pair H+G RNA (18-mer) C 7 U 8 G 9 * C 10 U 11 G 12 cWW ncWw cWW
90 IL_4E59_001 4E59 0.2175 0 Isolated non-canonical cWW pair A+B RNA duplex containing CCG repeats C 2 C 3 G 4 * C 2 C 3 G 4 cWW ncBW cWW
91 IL_4E59_002 4E59 0.2175 0 A+B RNA duplex containing CCG repeats C 2||||2_555 C 3||||2_555 G 4||||2_555 * C 2||||2_555 C 3||||2_555 G 4||||2_555 cWW ncBW cWW
92 IL_4E59_003 4E59 0.2175 0 A+B RNA duplex containing CCG repeats C 2||||3_555 C 3||||3_555 G 4||||3_555 * C 2||||3_555 C 3||||3_555 G 4||||3_555 cWW ncBW cWW
93 IL_4E48_005 4E48 0.2631 0 Isolated non-canonical cWW pair B+A RNA (20-mer) C 25 U 26 G 27 * C 14 U 15 G 16 cWW cWW
94 IL_5MWI_003 5MWI 0.2684 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 8 U 9 G 10 * C 17||||4_555 U 18||||4_555 G 19||||4_555 cWW cWW
95 IL_5MWI_006 5MWI 0.2684 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 8||||4_555 U 9||||4_555 G 10||||4_555 * C 17 U 18 G 19 cWW cWW
96 IL_4E48_003 4E48 0.2826 0 Isolated non-canonical cWW pair B+A RNA (20-mer) C 31 U 32 G 33 * C 8 U 9 G 10 cWW cWW
97 IL_4E48_002 4E48 0.3065 0 Isolated non-canonical cWW pair A+B RNA (20-mer) C 5 U 6 G 7 * C 34 U 35 G 36 cWW cWW
98 IL_4E48_001 4E48 0.3127 0 Isolated non-canonical cWW pair B+A RNA (20-mer) C 37 U 38 G 39 * C 2 U 3 G 4 cWW cWW
99 IL_4E48_004 4E48 0.3036 0 Isolated non-canonical cWW pair A+B RNA (20-mer) C 11 U 12 G 13 * C 28 U 29 G 30 cWW ncWw cWW
100 IL_3SZX_001 3SZX 0.2881 0 Isolated non-canonical cWW pair B+A RNA (19-mer) C 13 U 14 G 15 * C 7 U 8 G 9 cWW cWW
101 IL_1UN6_005 1UN6 0.2716 0 Isolated non-canonical cWW pair F 5S RIBOSOMAL RNA C 95 U 96 G 97 * C 79 U 80 G 81 cWW ncWw cWW
102 IL_3GM7_003 3GM7 0.2518 0 Isolated non-canonical cWW pair G+H RNA (18-mer) C 7 U 8 G 9 * C 10 U 11 G 12 cWW ncWw cWW
103 IL_4E48_006 4E48 0.2168 0 Isolated non-canonical cWW pair A+B RNA (20-mer) C 17 U 18 G 19 * C 22 U 23 G 24 cWW ncWw cWW
104 IL_4KNQ_002 4KNQ 0.1933 0 Isolated non-canonical cWW pair B RNA (20-mer) C 213||||4_555 C 214||||4_555 G 215||||4_555 * C 207 C 208 G 209 cWW cWW
105 IL_4KNQ_004 4KNQ 0.1933 0 Isolated non-canonical cWW pair B RNA (20-mer) C 213 C 214 G 215 * C 207||||4_555 C 208||||4_555 G 209||||4_555 cWW cWW
106 IL_4JGN_004 4JGN 0.1572 0 Isolated non-canonical cWW pair E RNA (20-mer) C 514 U 515 G 516 * C 508||||4_555 U 509||||4_555 G 510||||4_555 cWW ncWw cWW
107 IL_4JGN_002 4JGN 0.1572 0 Isolated non-canonical cWW pair E RNA (20-mer) C 514||||4_555 U 515||||4_555 G 516||||4_555 * C 508 U 509 G 510 cWW ncWw cWW
108 IL_3SZX_002 3SZX 0.1777 0 Isolated non-canonical cWW pair A+B RNA (19-mer) C 10 U 11 G 12 * C 10 U 11 G 12 cWW ncWw cWW
109 IL_5UNE_009 5UNE 0.2370 0 Isolated non-canonical cWW contact A+B RNA (47-MER) U 39 G 40 G 41 * U 7 G 8 A 9 cWW ncWW
110 IL_5UNE_001 5UNE 0.2748 0 Isolated non-canonical cWW contact B+A RNA (47-MER) U 39 G 40 G 41 * U 7 G 8 A 9 cWW ncWw cWW
111 IL_4LFB_006 4LFB 0.2455 0 Isolated non-canonical cWW pair A SSU rRNA C 99 A 101 G 102 * C 67 G 68 G 69 cWW cWW cWW
112 IL_4V88_385 4V88 0.1846 0 Isolated non-canonical cWW pair A6 SSU rRNA U 35 C 36 U 37 * A 471 U 472 A 473 cWW cWW cWW
113 IL_2ZKO_001 2ZKO 0.2860 0 Isolated non-canonical cWW pair D+C RNA (21-mer) U 9 U 10 A 11 * U 9 U 10 A 11 cWW cWW
114 IL_3GM7_005 3GM7 0.3060 0 Isolated non-canonical cWW pair G+H RNA (18-mer) C 13 U 14 G 15 * C 4 U 5 G 6 cWW cWW
115 IL_5MWI_004 5MWI 0.3448 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 14||||4_555 U 15||A||4_555 G 16||||4_555 * C 11 U 12||A G 13 cWW cWW
116 IL_5MWI_005 5MWI 0.3448 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 14 U 15||A G 16 * C 11||||4_555 U 12||A||4_555 G 13||||4_555 cWW cWW
117 IL_5MWI_007 5MWI 0.3187 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 20 U 21 G 22 * C 5||||4_555 U 6||||4_555 G 7||||4_555 cWW cWW
118 IL_5MWI_002 5MWI 0.3187 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 20||||4_555 U 21||||4_555 G 22||||4_555 * C 5 U 6 G 7 cWW cWW
119 IL_5VCI_002 5VCI 0.2611 0 Isolated non-canonical cWW pair B+A RNA (12-mer) C 7 U 8 G 9 * C 4 U 5 G 6 cWW ncwW cWW
120 IL_3GM7_006 3GM7 0.2646 0 Isolated non-canonical cWW pair G+H RNA (18-mer) C 16 U 17 G 18 * C 1 U 2 G 3 cWW ncwW cWW
121 IL_4JGN_005 4JGN 0.2614 0 Isolated non-canonical cWW pair E RNA (20-mer) C 517 U 518 G 519 * C 505||||4_555 U 506||||4_555 G 507||||4_555 cWW cwW cWW
122 IL_4JGN_001 4JGN 0.2614 0 Isolated non-canonical cWW pair E RNA (20-mer) C 517||||4_555 U 518||||4_555 G 519||||4_555 * C 505 U 506 G 507 cWW cwW cWW
123 IL_4KNQ_005 4KNQ 0.2360 0 Isolated non-canonical cWW pair B RNA (20-mer) C 216 C 217 G 218 * C 204||||4_555 C 205||||4_555 G 206||||4_555 cWW cWw cWW
124 IL_4KNQ_001 4KNQ 0.2360 0 Isolated non-canonical cWW pair B RNA (20-mer) C 216||||4_555 C 217||||4_555 G 218||||4_555 * C 204 C 205 G 206 cWW cWw cWW
125 IL_1ZH5_001 1ZH5 0.1883 0 Isolated non-canonical cWW pair C+D RNA (9-mer) C 3 U 4 G 5 * C 3 U 4 G 5 cWW ncwW cWW
126 IL_4V88_398 4V88 0.2571 0 Isolated non-canonical cWW pair A6 SSU rRNA A 257 C 258 U 259 * A 206 U 207 U 208 cWW cWW cWW
127 IL_4V5O_097 4V5O 0.2863 0 BA SSU rRNA A 254 C 255 U 256 * A 201 U 202 U 203 cWW ncWW cWW
128 IL_4WF9_017 4WF9 0.2679 0 Isolated non-canonical cWW pair X LSU rRNA A 618 U 619 G 620 * C 607 C 608 U 609 cWW cWW cWW
129 IL_4Y4O_192 4Y4O 0.2869 0 2A LSU rRNA A 575 U 576 G 577 * C 564 C 565 U 566 cWW cWW cWW
130 IL_5J7L_257 5J7L 0.3291 0 Isolated non-canonical cWW pair DA LSU rRNA A 575 U 576 G 577 * C 564 C 565 U 566 cWW cWW cWW
131 IL_4IOA_010 4IOA 0.3207 0 Isolated non-canonical cWW pair (H) X LSU rRNA A 584 U 585 G 586 * C 573 C 574 U 575 cWW cWW cWW
132 IL_4Y1M_005 4Y1M 0.3151 0 Isolated non-canonical cWW pair B E. coli yybP-ykoY riboswitch A 103 U 104 A 105 * U 4 U 5 U 6 cWW ncWw cWW
133 IL_5MWI_008 5MWI 0.2749 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 2||||4_555 U 3||||4_555 G 4||||4_555 * C 23 U 24 G 25 cWW cWw cWW
134 IL_5MWI_001 5MWI 0.2749 0 Isolated non-canonical cWW pair A RNA G(CUG)8C duplex C 2 U 3 G 4 * C 23||||4_555 U 24||||4_555 G 25||||4_555 cWW cWw cWW
135 IL_4PCJ_001 4PCJ 0.3289 0 Isolated non-canonical cWW pair A trCUG-3('5) C 1 U 2 G 3 * C 33 U 34 G 35 cWW cWw cWW
136 IL_5VCI_001 5VCI 0.2962 0 Isolated non-canonical cWW pair A+B RNA (22-mer) + RNA (12-mer) C 1 U 2 G 3 * C 10 U 11 G 12 cWW cWw cWW
137 IL_4V5O_151 4V5O 0.4052 0 BA SSU rRNA C 1323 U 1324 G 1325 * U 1341 U 1342 G 1343 cWW ncWw ncWW
138 IL_1MZP_001 1MZP 0.3503 0 Isolated non-canonical cWW pair B fragment of 23S rRNA C 50 U 51 U 52 * A 4 U 5 G 6 cWW cWw cWW
139 IL_5OB3_001 5OB3 0.3217 0 A RNA aptamer (69-MER) C 58 U 59 C 60 * G 10 U 11 G 12 cWW cWw cWW
140 IL_1U6B_005 1U6B 0.2883 0 Isolated non-canonical cWW pair B 197-MER C 100 U 101 U 102 * A 117 U 118 G 119 cWW cWw cWW
141 IL_3U4M_001 3U4M 0.2578 0 Isolated non-canonical cWW pair B LSU rRNA C 2179 U 2180 U 2181 * A 2108 U 2109 G 2110 cWW cWw cWW
142 IL_4V9F_047 4V9F 0.2887 0 Isolated non-canonical cWW pair 0 LSU rRNA C 1303 U 1304 C 1305 * G 1349 U 1350 G 1351 cWW cWw cWW
143 IL_4V8P_198 4V8P 0.3028 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA U 979 U 980 U 981 * A 990 U 991 A 992 cWW cWw cWW
144 IL_5TBW_034 5TBW 0.2775 0 Isolated non-canonical cWW pair 1 LSU rRNA U 954 U 955 U 956 * A 965 U 966 A 967 cWW cWw cWW
145 IL_5TBW_122 5TBW 0.3018 0 Isolated non-canonical cWW pair 1 LSU rRNA U 3280 U 3281 U 3282 * A 3168 U 3169 A 3170 cWW cWw cWW
146 IL_5AOX_001 5AOX 0.3649 0 Isolated non-canonical cWW pair C ALU JO CONSENSUS RNA C 18 A 19 C 20 * G 9 C 10 G 11 cWW cWW cWW
147 IL_1U9S_007 1U9S 0.3296 0 Isolated non-canonical cWW pair A RIBONUCLEASE P C 191 A 192 C 193 * G 177 C 178 G 179 cWW cWW cWW
148 IL_5TBW_016 5TBW 0.3552 0 Isolated non-canonical cWW pair 1 LSU rRNA U 429 U 430 U 431 * A 628 U 629 A 630 cWW cWW
149 IL_5D0B_001 5D0B 0.3975 0 Isolated non-canonical cWW pair F RNA (17-mer) A 37 A 38 U 39 * A 31 C 32 U 33 cWW cWW cWW
150 IL_4V8P_262 4V8P 0.3185 0 D1 LSU rRNA G 2775 C 2776 U 2777 * A 2758 A 2759 C 2760 cWW cWWa cWW
151 IL_4V5O_159 4V5O 0.3545 0 Isolated non-canonical cWW pair (H) BA SSU rRNA G 1614 U 1615 C 1616 * G 1710 U 1711 C 1712 cWW ncWw cWW
152 IL_4V88_465 4V88 0.3268 0 Isolated non-canonical cWW pair A6 SSU rRNA G 1642 U 1643 C 1644 * G 1757 U 1758 C 1759 cWW cWW
153 IL_4V8P_185 4V8P 0.2901 0 D1 LSU rRNA G 820 U 821 U 822 * A 689 U 690 C 691 cWW ncWw cWW
154 IL_1ZX7_006 1ZX7 0.3053 0 Isolated non-canonical cWW pair F+E RNA (14-mer) G 24 U 25 C 26 * G 10 U 11 C 12 cWW cWw cWW
155 IL_1ZX7_004 1ZX7 0.2846 0 Isolated non-canonical cWW pair D+C RNA (14-mer) G 24 U 25 C 26 * G 10 U 11 C 12 cWW cWw cWW
156 IL_1T0E_002 1T0E 0.2642 0 Isolated non-canonical cWW pair C+A RNA (17-mer) G 14 U 15 C 16 * G 10||A U 11 C 12 cWW cWw cWW
157 IL_4V88_446 4V88 0.2896 0 Isolated non-canonical cWW pair A6 SSU rRNA G 1213 U 1214 C 1215 * G 1448 U 1449 U 1450 cWW ncWw cWW
158 IL_4P43_004 4P43 0.2113 0 Isolated non-canonical cWW pair B+A RNA (23-mer) G 28 U 29 C 30 * G 19 U 20 C 21 cWW cWw cWW
159 IL_5B2P_001 5B2P 0.2317 0 Isolated non-canonical cWW pair B Guide RNA G 48 U 49 A 50 * U 24 U 25 C 26 cWW cWw cWW
160 IL_2O3V_004 2O3V 0.2175 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 19 U 20 C 21 * G 28 U 29 C 30 cWW cWw cWW
161 IL_5TBW_115 5TBW 0.1830 0 Isolated non-canonical cWW pair 1 LSU rRNA A 3040 U 3041 U 3042 * A 3012 U 3013 U 3014 cWW cWw cWW
162 IL_2ET8_004 2ET8 0.3154 0 Isolated non-canonical cWW pair A+B RNA (22-mer) G 18 U 19 C 20 * G 27 U 28 C 29 cWW cWw cWW
163 IL_3BNT_006 3BNT 0.3115 0 Isolated non-canonical cWW pair A A site of human mitochondrial ribosome G 18 U 19 C 20 * G 4||||4_665 U 5||||4_665 C 6||||4_665 cWW cWw cWW
164 IL_3BNT_001 3BNT 0.3115 0 Isolated non-canonical cWW pair A A site of human mitochondrial ribosome G 18||||4_665 U 19||||4_665 C 20||||4_665 * G 4 U 5 C 6 cWW cWw cWW
165 IL_2O3Y_004 2O3Y 0.2659 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 19 U 20 C 21 * G 28 U 29 C 30 cWW cWw cWW
166 IL_4P3T_006 4P3T 0.2406 0 Isolated non-canonical cWW pair B+A RNA (23-mer) G 28 U 29 C 30 * G 19 U 20 C 21 cWW cWw cWW
167 IL_4KYY_003 4KYY 0.2634 0 Isolated non-canonical cWW pair B+A RNA 17-mer G 5 U 6 U 7 * A 11 U 12 C 13 cWW cWw cWW
168 IL_4KYY_001 4KYY 0.2438 0 Isolated non-canonical cWW pair A+B RNA 17-mer G 5 U 6 U 7 * A 11 U 12 C 13 cWW cWw cWW
169 IL_3BNN_005 3BNN 0.3121 0 Isolated non-canonical cWW pair D+C A site of human ribosome G 17 U 18 C 19 * G 3 U 4 C 5 cWW cWw cWW
170 IL_3BNR_012 3BNR 0.2877 0 Isolated non-canonical cWW pair D+C A site of human mitochondrial ribosome, chain three G 3 U 4 C 5 * G 19 U 20 C 21 cWW cWw cWW
171 IL_4K31_001 4K31 0.2888 0 Isolated non-canonical cWW pair C+B RNA (23-mer) G 19 U 20 C 21 * G 5 U 6 C 7 cWW cWw cWW
172 IL_4K31_004 4K31 0.2890 0 Isolated non-canonical cWW pair B+C RNA (23-mer) G 19 U 20 C 21 * G 5 U 6 C 7 cWW cWw cWW
173 IL_2OE5_001 2OE5 0.2307 0 Isolated non-canonical cWW pair A+B RNA (16-mer) + RNA (17-mer) G 1405 U 1406 C 1407 * G 1494 U 1495 C 1496 cWW cWw cWW
174 IL_3TD0_006 3TD0 0.2312 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 19 U 20 C 21 * G 28 U 29 C 30 cWW cWw cWW
175 IL_3BNR_007 3BNR 0.2503 0 Isolated non-canonical cWW pair D+C A site of human mitochondrial ribosome, chain three G 17 U 18 C 19 * G 5 U 6 C 7 cWW cWw cWW
176 IL_5WTI_002 5WTI 0.2399 0 Isolated non-canonical cWW pair B RNA (123-MER) G 18 U 19 C 20 * G 10 U 11 C 12 cWW cWw cWW
177 IL_4P3U_006 4P3U 0.2605 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 19 U 20 C 21 * G 28 U 29 C 30 cWW cWw cWW
178 IL_4P3U_007 4P3U 0.2584 0 Isolated non-canonical cWW pair C+D RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW ncWw cWW
179 IL_4V88_417 4V88 0.2769 0 Isolated non-canonical cWW pair A6 SSU rRNA A 973 A 974 C 975 * G 624 C 625 U 626 cWW cWW cWW
180 IL_1Z7F_002 1Z7F 0.2931 0 Isolated non-canonical cWW pair A RNA (16-mer) A 10 A 11 U 12 * A 5||||6_765 C 6||||6_765 U 7||||6_765 cWW cWW cWW
181 IL_5Y85_006 5Y85 0.3298 0 Isolated non-canonical cWW pair C+D RNA (18-mer) + DNA/RNA (50-MER) G 13 A 14 C 15 * G 4 C 5 C 6 cWW cWW cWW
182 IL_5Y7M_007 5Y7M 0.2973 0 Isolated non-canonical cWW pair D RNA (52-MER) G 37 A 38 U 39 * A 11 C 12 C 13 cWW cWW cWW
183 IL_4V5O_101 4V5O 0.2768 0 Isolated non-canonical cWW pair BA SSU rRNA U 397 A 398 C 399 * G 380 G 381 A 382 cWW cWW
184 IL_5ED1_002 5ED1 0.2117 0 Isolated non-canonical cWW pair B+C RNA (23-mer) G 13 A 14 C 15 * G 9 A 10 C 11 cWW cWw cWW
185 IL_4V88_467 4V88 0.2092 0 Isolated non-canonical cWW pair A6 SSU rRNA U 1650 A 1651 C 1652 * G 1748 A 1749 A 1750 cWW cWw cWW
186 IL_4V5O_113 4V5O 0.1921 0 Isolated non-canonical cWW pair BA SSU rRNA A 951 A 952 C 953 * G 618 C 619 U 620 cWW cWW cWW
187 IL_2PWT_004 2PWT 0.2075 0 Isolated non-canonical cWW pair B+A 22-mer of the ribosomal decoding site G 26 U 27 C 28 * G 18 U 19 C 20 cWW cWW
188 IL_5Z1I_001 5Z1I 0.1942 0 Isolated non-canonical cWW pair A RNA (21-mer) G 5 U 6 C 7 * G 19||||8_555 U 20||||8_555 C 21||||8_555 cWW cWw cWW
189 IL_5Z1I_004 5Z1I 0.1942 0 Isolated non-canonical cWW pair A RNA (21-mer) G 5||||8_555 U 6||||8_555 C 7||||8_555 * G 19 U 20 C 21 cWW cWw cWW
190 IL_1KFO_002 1KFO 0.1846 0 Isolated non-canonical cWW pair A RNA (19-mer) G 11||||8_555 A 12||||8_555 G 13||||8_555 * C 6 C 7 U 8 cWW cWW cWW
191 IL_1KFO_003 1KFO 0.1846 0 Isolated non-canonical cWW pair A RNA (19-mer) G 11 A 12 G 13 * C 6||||8_555 C 7||||8_555 U 8||||8_555 cWW cWW cWW
192 IL_1ZZ5_002 1ZZ5 0.1750 0 Isolated non-canonical cWW pair A+B RNA (15-mer) + RNA (14-mer) G 10 U 11 C 12 * G 24 U 25 C 26 cWW ncWw cWW
193 IL_1ZZ5_004 1ZZ5 0.1501 0 Isolated non-canonical cWW pair C+D RNA (15-mer) + RNA (14-mer) G 10 U 11 C 12 * G 24 U 25 C 26 cWW ncWw cWW
194 IL_4ZC7_004 4ZC7 0.1550 0 Isolated non-canonical cWW pair A+B RNA duplex G 19 U 20 C 21 * G 28 U 29 C 30 cWW ncWw cWW
195 IL_4LFB_061 4LFB 0.0000 0 Isolated non-canonical cWW pair A SSU rRNA G 1474 G 1475 G 1476 * C 1424 U 1425 C 1426 cWW ncWW cWW
196 IL_3SZX_003 3SZX 0.1521 0 Isolated non-canonical cWW pair B+A RNA (19-mer) C 7 U 8 G 9 * C 13 U 14 G 15 cWW ncWw cWW
197 IL_4IOA_030 4IOA 0.1669 0 Isolated non-canonical cWW pair X LSU rRNA G 963 A 964 G 965 * U 974 C 975 C 976 cWW cWW cWW
198 IL_4Y4O_211 4Y4O 0.1992 0 Isolated non-canonical cWW pair 2A LSU rRNA G 952 A 953 G 954 * U 963 C 964 C 965 cWW cWW cWW
199 IL_5ED2_004 5ED2 0.1629 0 Isolated non-canonical cWW pair E+F RNA (23-mer) G 14 A 15 G 16 * C 8 C 9 C 10 cWW cWW cWW
200 IL_4P3T_005 4P3T 0.1855 1 Isolated non-canonical cWW pair A+B RNA (23-mer) G 16 A 18 G 19 * C 30 C 31 C 32 cWW cWW cWW
201 IL_4TS2_004 4TS2 0.2246 0 Isolated non-canonical cWW pair X+Y Spinach aptamer RNA, bimolecular construct G 20 U 21 G 22 * C 77 U 78 C 79 cWW cWw cWW
202 IL_5J7L_008 5J7L 0.3534 1 Single bulged G, near cWW AA SSU rRNA U 92 U 93 C 95 * G 75 G 76 A 77 cWW ncWWa ncWW
203 IL_4V5O_116 4V5O 0.3435 1 BA SSU rRNA U 647 U 649 C 650 * G 659 U 660 G 661 ncWW ncWW
204 IL_5M0H_001 5M0H 0.3637 1 Other IL A ASH1 E3 (42 nt-TL/TLR) A 37 U 38 U 39 * A 4 A 5 U 7 cWW cWW
205 IL_4P3U_001 4P3U 0.3413 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW cWW
206 IL_4V5O_156 4V5O 0.3787 0 BA SSU rRNA G 1518 U 1519 U 1520 * A 1535 U 1536 C 1537 cWW cWW
207 IL_4M4O_001 4M4O 0.3403 0 Isolated non-canonical cWW pair B RNA (59-MER) A 52 C 53 G 54 * C 6 A 7 U 8 cWW cWWa cWW
208 IL_1XJR_003 1XJR 0.4158 1 Isolated non-canonical cWW pair A s2m RNA G 32 G 34 G 35 * C 16 A 17 C 18 cWW cWW cWW
209 IL_5TBW_044 5TBW 0.3749 0 Isolated non-canonical cWW pair 1 LSU rRNA G 1087 U 1088 G 1089 * C 1069 U 1070 U 1071 cWW ncWw cWW
210 IL_4V88_444 4V88 0.3081 0 Isolated non-canonical cWW pair A6 SSU rRNA G 1464 C 1465 G 1466 * C 1173 C 1174 U 1175 cWW ncBW cWW
211 IL_5TBW_127 5TBW 0.2814 0 Isolated non-canonical cWW pair 1 LSU rRNA G 3252 G 3253 G 3254 * C 3233 A 3234 C 3235 cWW cWW cWW
212 IL_3DIL_006 3DIL 0.2149 0 Isolated non-canonical cWW pair A RNA (174-MER) G 115 G 116 G 117 * C 137 A 138 C 139 cWW cWW cWW
213 IL_3D0U_006 3D0U 0.2238 0 Isolated non-canonical cWW pair A Lysine Riboswitch RNA G 112 G 113 G 114 * C 134 A 135 C 136 cWW cWW cWW
214 IL_5MSF_005 5MSF 0.2683 1 R RNA (18-mer) G 3||||P_P G 4||||P_P G 6||||P_P * C 13||||P_P A 14||||P_P C 15||||P_P
215 IL_5MSF_001 5MSF 0.2683 1 Isolated non-canonical cWW pair R RNA (18-mer) G 3||||P_1 G 4||||P_1 G 6||||P_1 * C 13||||P_1 A 14||||P_1 C 15||||P_1 cWW cWW cWW
216 IL_4LFB_010 4LFB 0.3188 0 Isolated non-canonical cWW pair A SSU rRNA G 190|||K U 190|||L G 191 * C 186 C 187 C 188 cWW cWW cWW
217 IL_4V9F_017 4V9F 0.3117 0 Isolated non-canonical cWW pair 0 LSU rRNA A 597 C 598 G 599 * C 558 U 559 U 560 cWW cWW cWW
218 IL_4V9F_105 4V9F 0.3007 0 Isolated non-canonical cWW pair 9 5S rRNA C 107 C 108 G 109 * C 72 A 73 G 74 cWW cWW cWW
219 IL_5TBW_378 5TBW 0.3069 1 Isolated non-canonical cWW pair AS 5S rRNA A 84 G 85 G 87 * C 94 A 95 U 96 cWW cWW cWW
220 IL_4YHW_001 4YHW 0.1940 0 Isolated non-canonical cWW pair C+E U4 snRNA fragment + U6 snRNA fragment A 11 C 12 G 13 * C 68 C 69 U 70 cWW cWW
221 IL_4V83_235 4V83 0.3080 0 Isolated non-canonical cWW pair CV domain 3 of PSIC IGR IRES RNA G 6173 U 6174 G 6175 * C 6153 U 6154 C 6155 cWW ncwW cWW
222 IL_4V5O_137 4V5O 0.3741 0 Isolated non-canonical cWW pair (H) BA SSU rRNA C 1145 C 1146 U 1147 * G 1435 C 1436 G 1437 cWW ncWB ncWW
223 IL_2R8S_001 2R8S 0.2742 0 Isolated non-canonical cWW pair R P4-P6 RNA RIBOZYME DOMAIN C 208 A 210 C 211 * G 110 G 111 G 112 cWW cWW cWW
224 IL_1N33_070 1N33 0.2345 0 Z+Y A-SITE MESSENGER RNA FRAGMENT U 1 U 2 U 3 * G 34 G 35 A 36 cWW ncWWa cWW
225 IL_5TBW_042 5TBW 0.2564 0 Isolated non-canonical cWW pair 1 LSU rRNA A 1009 G 1010 A 1011 * U 1039 A 1040 U 1041 cWW cWW cWW
226 IL_4V8P_206 4V8P 0.2522 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA A 1035 G 1036 A 1037 * U 1065 A 1066 U 1067 cWW ncWW cWW
227 IL_4V8P_229 4V8P 0.2354 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA A 1685 G 1686 C 1687 * G 1812 A 1813 U 1814 cWW cWW cWW
228 IL_4V8P_256 4V8P 0.2174 0 D1 LSU rRNA G 2498 U 2499 C 2500 * G 2437 G 2438 C 2439 ncWW ncWW cWW
229 IL_5E81_376 5E81 0.2410 0 3L tRNA G 27 U 28 U 29 * A 41 A 42 U 43 ncWW ncWW cWW
230 IL_4IOA_079 4IOA 0.4374 0 X LSU rRNA G 2078 A 2079 U 2080 * A 2175 U 2176 U 2177 cWW ncWW cWW
231 IL_4M6D_011 4M6D 0.3719 0 Isolated non-canonical cWW pair H aptamer G 12 G 13 C 14 * G 46 A 47 C 48 cWW cWW ncWW
232 IL_4P8Z_001 4P8Z 0.3750 0 A Lariat capping ribozyme G 2 U 3 U 4 * A 185 A 186 U 187 cWW cWW cWW
233 IL_4LFB_063 4LFB 0.4014 0 Isolated non-canonical cWW pair A SSU rRNA G 1435 U 1436 C 1437 * G 1464 C 1465 C 1466 cWW cWW cWW
234 IL_5TBW_046 5TBW 0.4159 0 Isolated non-canonical cWW pair 1 LSU rRNA A 1120 U 1121 U 1122 * A 1136 C 1137 U 1138 cWW cWW cWW
235 IL_4V8P_210 4V8P 0.3999 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA A 1147 U 1148 U 1149 * A 1163 C 1164 U 1165 cWW cWW cWW
236 IL_4R0D_014 4R0D 0.3000 0 A Group II catalytic intron A 410 G 411 U 412 * A 354 A 355 U 356 cWW cWW cWW
237 IL_4M4O_002 4M4O 0.3134 0 Isolated non-canonical cWW pair B RNA (59-MER) G 12 G 13 C 14 * G 46 A 47 C 48 cWW cWW cWW
238 IL_5TBW_068 5TBW 0.3687 0 Isolated non-canonical cWW pair 1 LSU rRNA G 1661 G 1662 C 1663 * G 1786 A 1787 C 1788 cWW cWW cWW
239 IL_4V88_472 4V88 0.4216 0 Isolated non-canonical cWW pair A6 SSU rRNA G 1672 G 1673 C 1674 * G 1727 A 1728 C 1729 cWW cWW cWW
240 IL_3IVK_002 3IVK 0.3925 0 Isolated non-canonical cWW pair M class I ligase product A 102 A 103 C 104 * G 87 G 88 U 89 cWW cWW cWW ncWW
241 IL_3HHN_004 3HHN 0.3541 0 Isolated non-canonical cWW pair E Class I ligase ribozyme, self-ligation product A 102 A 103 C 104 * G 87 G 88 U 89 cWW cWW cWW
242 IL_4IOA_019 4IOA 0.3440 0 Isolated non-canonical cWW pair (H) X LSU rRNA G 767 U 768 C 769 * G 754 C 755 C 756 cWW cWW cWW
243 IL_5TBW_021 5TBW 0.3837 0 Isolated non-canonical cWW pair 1 LSU rRNA G 792 C 793 U 794 * G 668 U 669 C 670 cWW cWW cWW
244 IL_4V84_071 4V84 0.3855 0 AV RNA (34-MER) G 6192 U 6193 C 6194 * G 6183 A 6184 U 6185 ncWW cWW ncWW cWW
245 IL_5E81_371 5E81 0.2859 0 Self complementary 1K tRNA G 27 U 28 U 29 * A 41 A 42 U 43 ncWW cWW cWW
246 IL_4KR9_001 4KR9 0.3474 0 M RNA (39-MER) G 28 U 29 C 30 * G 6 A 7 U 8 cWW cWW cWW
247 IL_4KR9_002 4KR9 0.3497 0 X RNA (39-MER) G 28 U 29 C 30 * G 6 A 7 U 8 cWW cWW cWW
248 IL_5UNE_007 5UNE 0.3867 0 Isolated non-canonical cWW pair B+A RNA (47-MER) G 12 G 13 C 14 * G 31 G 32 C 33 ncWW cWW
249 IL_5UNE_003 5UNE 0.2845 0 Isolated non-canonical cWW pair A+B RNA (47-MER) G 12 G 13 C 14 * G 31 G 32 C 33 cWW cWW
250 IL_4V8P_172 4V8P 0.3685 0 D1 LSU rRNA G 443 A 444 C 445 * G 532 G 533 U 534 cWW ncWW cWW
251 IL_4WZJ_020 4WZJ 0.3193 0 XXX U4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor. G 6 A 7 C 8 * G 21 G 22 C 23 cWW cWW cWW
252 IL_4V5O_115 4V5O 0.3204 0 BA SSU rRNA A 665 A 666 C 667 * G 641 G 642 U 643 cWW cWW cWW
253 IL_5AY2_003 5AY2 0.2874 0 Isolated non-canonical cWW pair A+B RNA (12-mer) A 8 C 9 U 10 * A 3 C 4 U 5 cWW cWW
254 IL_5AY2_001 5AY2 0.2893 0 Isolated non-canonical cWW pair B+A RNA (12-mer) A 8 C 9 U 10 * A 3 C 4 U 5 cWW cWW
255 IL_4R0D_011 4R0D 0.3682 0 A Group II catalytic intron G 198 U 199 C 200 * G 290 G 291 C 292 cWW ncWW cWW
256 IL_2ZNI_001 2ZNI 0.2159 0 C bacterial tRNA U 39 U 40 C 41 * G 29 G 30 A 31 cWW ncWWa cWW
257 IL_4ZC7_001 4ZC7 0.2172 0 Isolated non-canonical cWW pair B+A RNA duplex G 42 U 43 C 44 * G 5 U 6 C 7 cWW ncWw cWW
258 IL_3TD0_001 3TD0 0.2112 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW ncWw cWW
259 IL_3LA5_001 3LA5 0.2514 0 A Purine riboswitch U 16 U 17 C 18 * G 78 G 79 A 80 cWW ncWW cWW
260 IL_4NGF_002 4NGF 0.3180 0 Isolated non-canonical cWW pair G+H RNA (17-mer) G 7 U 8 C 9 * G 7 U 8 C 9 cWW ncwW cWW
261 IL_1MFQ_002 1MFQ 0.3102 0 Isolated non-canonical cWW pair A 7S RNA of human SRP A 228 U 229 C 230 * G 120 U 121 U 122 cWW cwW cWW
262 IL_3BNN_008 3BNN 0.3189 0 Isolated non-canonical cWW pair C+D A site of human ribosome G 17 U 18 C 19 * G 3 U 4 C 5 cWW cwW cWW
263 IL_2O3Y_001 2O3Y 0.2751 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW cwW cWW
264 IL_2OE8_001 2OE8 0.2956 0 Isolated non-canonical cWW pair B+A RNA (17-mer) G 1494 U 1495 C 1496 * G 1405 U 1406 C 1407 cWW cwW cWW
265 IL_4P3T_001 4P3T 0.2617 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW ncwW cWW
266 IL_2O3V_001 2O3V 0.2817 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW cwW cWW
267 IL_4V8P_241 4V8P 0.3148 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA G 1964 C 1965 U 1966 * A 2102 A 2103 C 2104 cWW cWW cWW
268 IL_5TBW_079 5TBW 0.3586 0 Isolated non-canonical cWW pair 1 LSU rRNA G 1940 C 1941 U 1942 * A 2106 A 2107 C 2108 cWW cWW cWW
269 IL_5CCB_002 5CCB 0.3631 0 N tRNA A 31||||7_555 C 32||||7_555 U 33||||7_555 * A 37||||7_555 A 38||||7_555 U 39||||7_555 cWW cWW cWW
270 IL_5CCB_001 5CCB 0.3631 0 Isolated non-canonical cWW pair N tRNA A 31 C 32 U 33 * A 37 A 38 U 39 cWW cWW cWW
271 IL_3MEI_002 3MEI 0.3466 0 Isolated non-canonical cWW pair B+A RNA (23-mer) G 13 C 14 C 15 * G 8 C 9 C 10 cWW ncWB cWW
272 IL_1YZ9_002 1YZ9 0.2979 0 Isolated non-canonical cWW pair F+E RNA (11-mer) A 15 C 16 U 17 * A 4 C 5 U 6 cWW ncWB cWW
273 IL_1YZ9_001 1YZ9 0.3064 0 Isolated non-canonical cWW pair C+D RNA (11-mer) A 4 C 5 U 6 * A 15 C 16 U 17 cWW ncWB cWW
274 IL_5TBW_112 5TBW 0.3325 0 Isolated non-canonical cWW pair 1 LSU rRNA A 2926 C 2927 C 2928 * G 2918 A 2919 U 2920 cWW cWW cWW
275 IL_5J7L_050 5J7L 0.4259 0 Isolated non-canonical cWW pair AA SSU rRNA G 1061 U 1062 C 1063 * G 1193 U 1194 C 1195 cWW cwW cWW
276 IL_4LFB_047 4LFB 0.4075 0 Isolated non-canonical cWW pair A SSU rRNA G 1061 U 1062 C 1063 * G 1193 U 1194 C 1195 cWW cwW cWW
277 IL_4P43_001 4P43 0.3604 0 Isolated non-canonical cWW pair A+B RNA (23-mer) G 5 U 6 C 7 * G 42 U 43 C 44 cWW cwW cWW
278 IL_2O3X_004 2O3X 0.2780 0 Isolated non-canonical cWW pair B+A RNA (23-mer) G 28 U 29 C 30 * G 19 U 20 C 21 cWW cwW cWW
279 IL_4P3U_012 4P3U 0.2798 0 Isolated non-canonical cWW pair C+D RNA (23-mer) G 19 U 20 C 21 * G 28 U 29 C 30 cWW ncwW cWW
280 IL_4WF9_042 4WF9 0.2911 0 Isolated non-canonical cWW pair X LSU rRNA G 1081 C 1082 G 1083 * C 1160 A 1161 C 1162 cWW ncWW cWW
281 IL_4IOA_025 4IOA 0.3007 0 X LSU rRNA A 936 C 937 G 938 * C 864 A 865 U 866 cWW cWW cWW
282 IL_4V8P_273 4V8P 0.3661 0 Isolated non-canonical cWW pair (H) D1 LSU rRNA A 2914 C 2915 C 2916 * G 2906 A 2907 U 2908 cWW cWW cWW
283 IL_4V88_426 4V88 0.4251 1 Isolated non-canonical cWW pair A6 SSU rRNA A 850 U 851 C 852 * G 819 U 821 U 822 cWW cwW cWW
284 IL_4KZD_003 4KZD 0.3881 0 Isolated non-canonical cWW pair R RNA (84-MER) G 17 U 18 G 19 * C 66 U 67 C 68 cWW cwW cWW
285 IL_3RG5_002 3RG5 0.3646 0 Isolated non-canonical cWW pair B Selenocysteine transfer RNA A 5|||B U 6 G 7 * C 66 U 67 U 67|||A cWW cwW cWW
286 IL_3RG5_003 3RG5 0.3646 0 B Selenocysteine transfer RNA A 5|||B|1_556 U 6||||1_556 G 7||||1_556 * C 66||||1_556 U 67||||1_556 U 67|||A|1_556 cWW cwW cWW
287 IL_4ZDO_001 4ZDO 0.3275 0 Isolated non-canonical cWW pair (H) E Selenocysteine transfer RNA A 5||A|C U 6||A G 7||A * C 65||A U 66||A U 67||A|A cWW cwW cWW
288 IL_353D_001 353D 0.2372 0 A+B RNA (12-mer) G 8 U 9 G 10 * U 15 G 16 C 17 cWW ncWWa cWW
289 IL_4LFB_059 4LFB 0.3008 0 Isolated non-canonical cWW pair A SSU rRNA G 1486 G 1487 G 1488 * C 1412 A 1413 U 1414 cWW cWW cWW
290 IL_5J7L_061 5J7L 0.3070 0 Isolated non-canonical cWW pair AA SSU rRNA G 1486 G 1487 G 1488 * C 1412 A 1413 U 1414 cWW cWW cWW
291 IL_5TBW_110 5TBW 0.3262 0 Isolated non-canonical cWW pair 1 LSU rRNA G 2912 C 2913 G 2914 * C 2889 A 2890 U 2891 cWW ncWWa cWW
292 IL_4AOB_010 4AOB 0.3503 0 A SAM-I riboswitch G 71||||7_555 A 72||||7_555 G 73||||7_555 * C 78||||7_555 G 79||||7_555 U 80||||7_555 cWW ncWW cWW
293 IL_4AOB_005 4AOB 0.3503 0 Isolated non-canonical cWW pair A SAM-I riboswitch G 71 A 72 G 73 * C 78 G 79 U 80 cWW ncWW cWW
294 IL_4V5O_121 4V5O 0.3532 1 BA SSU rRNA G 935 U 936 U 938 * G 846 A 847 C 848 cWW ncWW ncWW
295 IL_3TD0_002 3TD0 0.4030 1 Isolated non-canonical cWW pair B+A RNA (23-mer) G 39 A 40 G 42 * C 7 G 8 C 9 cWW cWW cWW
296 IL_3TD0_005 3TD0 0.3814 1 Isolated non-canonical cWW pair A+B RNA (23-mer) G 16 A 17 G 19 * C 30 G 31 C 32 cWW cWW cWW
297 IL_4V5O_160 4V5O 0.4106 1 BA SSU rRNA G 1707 A 1708 G 1710 * C 1616 G 1617 C 1618 cWW cWW cWW
298 IL_4ZC7_002 4ZC7 0.4963 0 B+A RNA duplex A 39 A 40 G 42 * C 7 G 8 U 9 cWW ncWW cWW
299 IL_1MFQ_003 1MFQ 0.4952 0 Isolated non-canonical cWW pair A 7S RNA of human SRP A 163 G 164 G 165 * U 132 A 133 U 134 cWW ncWW cWW
300 IL_4IOA_054 4IOA 0.5814 1 X LSU rRNA G 1573 A 1574 G 1576 * U 1447 A 1448 C 1449 cWW ncWw cWW
301 IL_4V88_475 4V88 0.4782 0 A6 SSU rRNA G 1715 C 1716 G 1717 * U 1684 G 1685 C 1686 cWW ncWW cWW
302 IL_4V88_457 4V88 0.6230 2 Isolated non-canonical cWW pair A6 SSU rRNA G 1352 U 1353 G 1354 * U 1369 U 1372 C 1373 cWW cwW cWW
303 IL_1WNE_001 1WNE 0.6276 0 C+B RNA (5-mer) G 917 C 918 C 919 * G 906 G 907 C 908 cWW cWW
304 IL_5UNE_006 5UNE 0.4936 0 Isolated non-canonical cWW pair A+B RNA (47-MER) C 27 A 28 G 29 * U 16 A 17 G 18 cWW cwW cWW
305 IL_5J7L_307 5J7L 0.8365 4 Intercalated tWH DA LSU rRNA C 1990 U 1991 U 1993 * A 1669 C 1670 G 1674 cWW cWW
306 IL_4WF9_065 4WF9 0.8512 4 Intercalated tWH X LSU rRNA C 2017 U 2018 U 2020 * A 1713 C 1714 G 1718 cWW cWW
307 IL_4V9F_062 4V9F 0.8285 4 Intercalated tWH 0 LSU rRNA C 2031 U 2032 U 2034 * A 1747 U 1748 G 1752 cWW cWW
