Motif IL_49714.1 Version IL_49714.1 of this group appears in releases 3.89 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 4-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3TZR_001 | 3TZR | 0.0000 | 2 | Major groove intercalation | A+B | RNA (20-mer) + RNA (16-mer) | G | 52 | C | 55 | U | 56 | A | 57 | C | 58 | * | G | 110 | C | 111 | cWW | ncWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAACUAC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACUA* | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Major groove intercalation (1)
- Basepair signature
- cWW-L-cWW-L-L
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: