Motif IL_49976.1 Version IL_49976.1 of this group appears in releases 1.5 to 1.13
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-4 | 1-5 | 1-8 | 4-5 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4BPP_076 | 4BPP | 0 | 5 | A | 18S RRNA | G | 1459 | U | 1460 | U | 1462 | C | 1465 | * | G | 1485 | U | 1486 | A | 1487 | C | 1490 | ncSs | tSS | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GUAUUUC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAUUU*UAAU | 1 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_49976.1 | Only in the child motif |
---|---|---|---|
IL_16977.1 Compare | IL_4BPP_076 | IL_3U5F_077 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-cSS-L-cSS-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: