Motif IL_52564.1 Version IL_52564.1 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8B0X_120 | 8B0X | 0.0000 | 0 | 180 degree turn (H) | a | LSU rRNA | C | 1509 | A | 1510 | A | 1511 | G | 1512 | * | U | 1483 | G | 1484 | cWW | cWW |
| 2 | IL_9DFE_053 | 9DFE | 0.7671 | 1 | 180 degree turn (H) | 1A | LSU rRNA | C | 1582 | A | 1583 | A | 1586 | A | 1587 | * | U | 1415 | G | 1416 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*UG | 1 |
| CACAA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA* | 1 |
| ACA* | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (H) (2)
- Basepair signature
- cWW-L-cWW-L
- Heat map statistics
- Min 0.77 | Avg 0.38 | Max 0.77
Coloring options: