#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 361-171-362-353-137-814-1817-3619-3422-3324-3225-30
1 IL_4IOA_0404IOA01X LSU rRNAG1066G1067A1068G1069G1070U1071G1073*C1087A1088C1089C1090C1091U1092U1093C1094A1095A1096A1097G1098A1099G1100U1101G1102C1103G1104U1105A1106A1107U1108A1109G1110C1111U1112C1113A1114C1115ntsScWWtSHncWWcWWntWWcSscWWcWwcwWtSH

3D structures

Complete motif including flanking bases
SequenceCounts
GGAGGUUG*CACCCUUCAAAGAGUGCGUAAUAGCUCAC1
Non-Watson-Crick part of the motif
SequenceCounts
GAGGUU*ACCCUUCAAAGAGUGCGUAAUAGCUCA1

Release history

Release1.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.171.182.0
Date2013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-202014-09-042014-10-072017-04-24
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Basepair signature
    cWW-tSS-tSH-L-L-L-L-cWW-L-L-L-L-L-L-L-L-cSS-L-L-L-cSW-cWW-L-cWW-R-tSH-R-R-R-R
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
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